KEGG   Roseomonas gilardii: RGI145_05085
Entry
RGI145_05085      CDS       T04615                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rgi  Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:rgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rgi03400]
    RGI145_05085
Enzymes [BR:rgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RGI145_05085
    5.6.2.6  RNA 3'-5' helicase
     RGI145_05085
DNA repair and recombination proteins [BR:rgi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RGI145_05085
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DUF2064
Other DBs
NCBI-ProteinID: APT59112
UniProt: A0A1L7AK22
LinkDB
Position
1:complement(1171227..1173713)
AA seq 828 aa
MALLEAAEAGRSALLIAPTGGGKTLAGFLPSLIDLAQGSPDQGATRGLHTLYISPLKALA
VDIARNLTTPIEEMGLPIRVETRTGDTPANRRQRQRENPPEILLSTPESLVLLLSLPDAA
EIFGGLRAVVVDEVHALAGTKRGDQLALCLSRLQSLAPGLRRVGLSATVAQPEALRAWIA
PDARPEGAALILGKGGADPSLEIVLPEGHLPWGGHMGLASAPEIYRRIGGAGVTIVFVNT
RAQSELIFQALWRLNDDNLPIALHHGSLQIEQRRKVEAAMAAGRLRAVVATASLDMGIDW
GAVDQVIQVGAPKGVSRLMQRIGRANHRMDEPSRAVLVPANRFEVIECTAATEAVAAHEL
DGEAPRAGGLDVLAQHILAMACHAPFRADELHAEVTRAAPYAALSRRDFDDVLRFAEDGG
YALQAYERFRKLFRDSEDLIHIRDERVARQVRMNLGTITDSPMVKVRIRGGPVLGEVEEW
FVSTLEPGHCFLFAGQTLRYEGMDALSVIVSRGGDEEPRVPTYAGARLPLSTYLSRRVRA
ILADPRRWRALPEPVREWLRLQQRQSELPDRDGLLIESFPHHGRWFMVAYCFEGRLAHQT
LGMLVTKRMEGMGHGPLGYLATDYVLATWSAFEPTEPERLFEEDILGEELEEWIAESSML
RRTFRNIATVAGLLEKNHPGAEKSGRQMTMNADLIYDVLRKHDPDHILLRATRQEAAYGL
TDVRRIADLLARVRGRIRVRALDRVSPLAVPALIEEGREWVPGGAEDALLAEAAALVEEV
TDGAEHFAEVLSEVTEGVRIRAGVVDRPRHRKGRERRGRGLPGLRRGA
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggcgctgctggaggccgccgaggccggccggagcgccctgctgatcgccccgaccggc
ggcggcaagaccctggcaggcttcctgcccagcctgatcgatctcgcgcagggctctccg
gaccagggggccacccgggggctgcacacactctacatctccccgctcaaggcgctggcg
gtggacatcgcccgcaacctgaccacgcccatcgaggagatgggcctgcccatccgggtg
gaaacgcgcaccggcgacacccccgccaaccgccgccagcggcagcgcgagaacccgccg
gagatcctgctttccacgccggaaagcctggtcctgctgctctccctgcccgatgcggcg
gaaatcttcggcggcctgcgcgccgtggtggtggacgaggtgcatgcgctggccggcacc
aaacgcggcgaccagctcgccctttgcctgtcgcgtctgcaatccctggcgcccggcctg
cggcgcgtcggcctttccgccacggtggcgcagccggaggcgctgcgggcctggatcgcg
ccggatgcgcggcccgagggcgcggcgctgatcctgggcaagggaggcgccgatccgagc
ctggagatcgtgctgccggaagggcacctgccctggggcgggcatatgggcctggccagc
gcgcccgagatctaccgccgcatcggcggggccggcgtcaccatcgtcttcgtcaacacg
cgcgcccagtccgagctgatcttccaggcactgtggcgcctcaacgacgacaacctgccc
atcgccctgcaccacggctccctgcagatcgagcagcggcgcaaggtggaggccgcgatg
gcggcggggcggttgcgcgccgtggtggcgacggcctcgctcgacatgggcatcgactgg
ggcgcggtggaccaggtgatccaggtcggcgcgccgaagggcgtctcgcgcctgatgcag
cgcatcggccgcgccaaccaccggatggacgaaccctcccgcgccgtactggtgccggcc
aaccgcttcgaggtgatcgagtgcactgccgccaccgaggccgtggcggcgcatgagctg
gatggggaggcgccgcgcgccggcgggctggacgtgctggcacagcatatcctggccatg
gcttgccacgcacccttccgggcggacgagctccatgccgaggtgacgcgggccgcgccc
tatgccgcgctgtcgcggcgcgacttcgacgacgtgctgcgcttcgcggaggatggtggc
tacgcgctgcaggcctatgagcgcttccgcaagctgttccgcgacagcgaggacctcatc
cacatccgcgacgagcgcgtggcgcggcaggtgcggatgaatctcggcaccatcaccgac
agcccgatggtgaaggtgcgcatccgcggcgggccggtgctgggcgaggtggaggaatgg
ttcgtttccacgctggagccggggcactgcttcctcttcgccgggcagacgctgcgctac
gagggaatggacgcactctccgtcatcgtttcgcgcggcggcgacgaggagccgcgcgta
ccgacctatgccggcgcgcggctgccgctttccacctatctctcgcgccgggtgcgggcg
atcctggccgatccccggcgctggcgcgccctgccggagccggtgcgcgaatggctgcgg
ctgcagcagcgacagtccgagctgcccgaccgcgacgggctgctgatcgagagcttcccg
catcacggccgctggttcatggtcgcctactgcttcgagggcaggctcgcacatcagacc
ctggggatgctggtgaccaagcggatggaggggatgggccacggcccgctcggctacctt
gccaccgactacgtgctcgccacctggagcgccttcgagcccaccgagccggaacgcctc
ttcgaggaggacatcctgggcgaagagctggaggaatggatcgccgagagttccatgctc
cgccgcaccttccgcaacatcgccaccgtcgccgggctgctggagaagaaccatcccggc
gccgagaagagcgggcggcagatgacgatgaacgccgaccttatctacgacgtgctgcgg
aagcacgacccggaccacatcctgctgcgcgccacccggcaggaggccgcctatggcctc
accgatgtgcgccgcatcgccgacctgctggcgcgggtgcgcgggcgcatccgcgtgcgg
gcgctcgaccgtgtctcgcccctcgccgtgccggcgctgatcgaggaagggcgcgaatgg
gtcccgggcggcgccgaggacgccctgctggccgaggccgccgcgctggtggaggaagtc
accgacggcgccgagcatttcgccgaggtgctgagcgaggtgacggaaggcgtccgcatc
cgcgccggggtggtggaccgcccgcgccaccgcaaggggcgggaacggcgcggccgtggc
ctgcccggcctgcggcgcggggcctga

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