Roseomonas gilardii: RGI145_05825
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Entry
RGI145_05825 CDS
T04615
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rgi
Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgi03016
]
RGI145_05825
Enzymes [BR:
rgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RGI145_05825
Transfer RNA biogenesis [BR:
rgi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RGI145_05825
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
APT59133
UniProt:
A0A1L7AK32
LinkDB
All DBs
Position
1:complement(1317906..1318439)
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AA seq
177 aa
AA seq
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MRLFVALALPELLRDQLAGLVGGIPGAKWVPPDNYHLTLRFIGAIERWRAEEVDEALAAI
RARPFDLSLCGVGTFEKAGRIQSLWVGVERTEALSHLQAKVETALQRVGLEPERRRFAPH
ITLARVDRAEVPKLVSYVQAHNLFRAPPVRMEQFTLFSSLLGKEHSVYTPEVEYALA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
ttgcgactgtttgtggctctcgccctgcccgaattgctgcgcgaccagcttgccggcctt
gtcggcggcatccctggggcgaaatgggtgccgcccgacaactaccacctgaccctgcgc
ttcatcggggccatcgagcgctggcgggccgaggaggtggacgaggcgctcgccgccatc
cgtgcccgccccttcgacctctcgctctgcggcgtcggcaccttcgagaaggcggggcgg
atccagagcctctgggtcggggtggagcgtaccgaggcgctgtcgcatctccaggccaag
gtggagaccgccctgcagcgcgtggggctggaaccggagcgccgccgcttcgcgccgcac
atcaccctggcgcgggtggaccgggccgaggtgccgaagctcgtctcctatgtccaggcg
cacaacctgttccgcgcgccgccggtgcggatggagcagttcacgctcttctcctcgctg
ctcggcaaggagcactcggtctatacgccggaggtggagtacgccctggcctga
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