Roseomonas gilardii: RGI145_06685
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Entry
RGI145_06685 CDS
T04615
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rgi
Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rgi03009
]
RGI145_06685
Enzymes [BR:
rgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RGI145_06685
Ribosome biogenesis [BR:
rgi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RGI145_06685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
PabTrmU54_TRAM_dom
TRAM
Motif
Other DBs
NCBI-ProteinID:
APT59162
LinkDB
All DBs
Position
1:complement(1495347..1496591)
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AA seq
414 aa
AA seq
DB search
MGSGGDGVATLPEGGTAFLPFTLPGERVRARIAGKRGEAVMAEAEAVLRPSPERVAPPCR
YFGTCGGCALQHWDGAAYRAWKAARLAEALARAGFPDTPVAPLAPCPTMTRRRADLAIRQ
GADGVRIGFHERAGTHVVDMRECHVLGPAILTLLEPLRGLFARLRGFRREASALVNLLDT
GPDLLLRTDAPLTAQDRQILAAFGVDHGIPRIAWARDKGAPEIAAQSGGVSLMLDGVAVP
PAPGAFLQATPEGEAAIVAAVLAALPRRLPAKARIADLYAGVGTLSLPLARLARVDAFEG
EAEAVAALAAGANKAMRRVQAKRRDLARQPLLPAELGAYAAVVLDPPYAGAAEQMGIIAR
SRVERVVYVSCNPVALARDAALLKRGGWRAVSAVPVDQFLWSPHLESVVAFARG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgggcggcgacggtgtcgccaccctgccggaagggggcaccgccttcctgccc
ttcaccctgcccggcgagcgggtccgcgcccgcatcgccggcaagcgtggcgaggccgtg
atggcggaggccgaggcggtcctgcgccccagcccggagcgcgtcgccccgccctgccgc
tatttcggcacctgcggcggctgcgcgctgcagcactgggacggcgcggcctatcgcgcc
tggaaggccgcgcggctggccgaggcgctggcccgcgccggctttcccgacacgcccgtc
gccccgctggccccctgccccaccatgacgcgccgccgcgccgacctcgccatccgccag
ggcgcggacggggtgcggatcggcttccatgaacgggccgggacgcatgtggtggacatg
cgggaatgccatgtgctcggccccgcgatcctcacgctgctggagccgctgcgcggcctc
ttcgcccggctgcgcggcttccggcgggaggcctcggccctggtcaacctgctcgacacc
gggccggacctgctgctgcgcaccgatgcgcccctgaccgcccaggaccgccagatcctg
gcggcgttcggcgtggatcacggcattccccgcattgcctgggcccgcgacaagggcgcg
ccggagatcgcggcgcagagcggcggcgtctcgctgatgctcgatggcgtggcggtgccc
ccggcgcccggtgccttcctccaggcgacgccggagggcgaggccgcgatcgtcgcggcc
gtgctggcggccctgccgcgcaggctgcctgccaaggcccggatcgccgatctctatgcg
ggggtgggcacgctgtccctgcccctggcccggctcgcccgggtggatgccttcgagggc
gaggccgaggccgtcgcggcgctcgccgccggcgccaacaaggccatgcgccgcgtccag
gccaagcgccgcgacctcgcgcggcagccgctgttgcccgccgagctcggcgcctatgcc
gccgtggtgctggacccgccctatgccggcgccgccgagcagatgggaatcatcgcccgg
agccgggtggagcgggtggtctatgtgtcctgcaaccccgtcgccctggcgcgcgacgcg
gcgctgctgaagcgcggtggctggcgtgccgtttcggccgtgccggtggaccagttcctg
tggtcgccgcacctcgaatccgtggtggcattcgcccggggctga
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