Roseomonas gilardii: RGI145_07805
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Entry
RGI145_07805 CDS
T04615
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rgi
Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgi03032
]
RGI145_07805
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_07805
Enzymes [BR:
rgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RGI145_07805
DNA replication proteins [BR:
rgi03032
]
Prokaryotic type
DNA Topoisomerases
RGI145_07805
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGI145_07805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
APT57009
UniProt:
A0A1L7AEC8
LinkDB
All DBs
Position
1:complement(1739633..1742365)
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AA seq
910 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGGGYKVIASFGHVRDLPAKDGSVRPEEGFAMDWESEERGE
RQLREIASALKGAKRLFLATDPDREGEAISWHVREMLEQKRLLKGLEVHRITFNEITKRA
IQYAIEHPRDLDTPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFRPREYWTVETRFATPIGAHFTARLTHLDGKRLEQFDLPDEAAAKRAVAAIEA
GEFSVASVEKKRVRRNPQAPFTTSTLQQEASRKLGFGAQATMRLAQQLYEGVEIGGETVG
LITYMRTDGVQMSAEAIQAIRGHVGEEFGQNYLPPQAREYSSRAKNAQEAHEAIRPTDVA
RTPMQVARYLNPEQRRLYDLVWKRAVASQMASAELDQTTVEIAEGTGRTKLRATGSVIAF
DGFLKLYREDVDDAPAALGEEDGRVLPPVAEKDPLKRGEVAPEQHFTQPPPRYSEASLVK
KMEELGIGRPSTYASILQTLQDRSYVKLEKRRFQPEDRGRLVTAFLVAFFERYVDSNFTA
ALEEKLDDISGGRADWREVMAEFWDAFSKAVAATKDLKISDVIDALDEDLGPHFFPPADD
GKDPRECPNCHTGRLGLRLGKTGAFIGCSNYPECRYTRPLIAPGAEGDEAAGFADGVREL
GASPEGVPVTMRRGPYGIYVQLGEPGVDAKGKPTKPRRASLTRGMEPEGVTLERALALLS
MPRIVGVHPETGEEITAHLGRFGPYLTMGTLSKSLDKDDDVLTIGLNRAVALLAEAKPRS
VVLGEHPKDNAPVEIRRGRFGPYAQHGQTVASLPRNVQVEDFTLEQAVALLAEKGKQLAP
KGKAGAKGKAKATAKKAAAKPAAEAGEEKKPAAKKAAPRKAAPKAPSKATAKPAAGKPAT
KPAARKTAKA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgtcgtcgtagaatcccccgccaaggccaagaccatcaacaagtatctg
ggtggcggctacaaggtcatcgcctccttcggccatgtgcgcgacctgcccgcaaaggac
ggttcggtgcggcccgaggaaggcttcgccatggactgggagtccgaggagcgcggggag
cggcagctccgcgagatcgcctcggcgctgaagggggccaagcggctcttcctcgccacc
gacccggatcgcgagggcgaggccatctcctggcatgtgcgggagatgctggagcagaag
cggctgctgaagggccttgaggtccaccgcatcaccttcaacgagatcaccaagcgcgcc
atccagtacgccatcgagcatccgcgcgacctggatacgccgctgatcgaggcctatctg
gcccggcgggcgctcgactacctcgtgggcttcacgctctcccccgtgctgtggcgcaag
ctgccgggcagccgttcggccgggcgggtgcagtcggtcgcgctgcgcctgatctgcgag
cgcgaggcggagatcgaggtcttccggccgcgcgagtactggacggtggagacccgcttc
gccacgccgatcggggcgcatttcaccgcgcggctgacgcatctcgacggcaagcggctg
gagcagttcgacctgcccgacgaggccgccgcgaagcgcgccgtcgccgccatcgaggcg
ggcgagttcagcgtcgcctcggtcgagaagaagcgggtccgccgcaacccgcaggcgccc
ttcaccacctcgaccctgcagcaggaggcctcgcgcaagctcggcttcggcgcccaggcg
acgatgcgcctggcgcagcagctctatgagggcgtggagatcggcggcgagacggtcggc
ctgatcacctatatgcggaccgacggcgtgcagatgtcggccgaggcgatccaggccatc
cgcggccatgtcggcgaggagttcggccagaactacctcccgccgcaggcccgcgagtat
tcctcccgcgccaagaacgcccaggaggcgcacgaggcgatccgccccaccgatgtcgcg
cgcaccccgatgcaggtggcgcgctacctgaatccggagcagcggcgcctctacgacctg
gtctggaagcgtgccgtggccagccagatggcctcggcggagctggaccagaccacggtg
gagatcgccgagggaacgggccggacgaagctgcgcgccaccggctcggtgatcgccttc
gacggcttcctgaagctgtaccgggaggatgtggacgatgcccccgccgcgctcggcgag
gaggacgggcgcgtcctgccgccggtggcggagaaggacccgctgaagcgcggcgaggtg
gcgccggagcagcatttcacccagccgccgccgcgctattccgaggcctcgctggtgaag
aagatggaggagctcggcatcggccgcccctccacctatgcctcgatcctgcagacgctg
caggaccgcagctatgtgaagctggagaagcggcgtttccagccggaggatcgcggacgg
ctggtcaccgccttcctggtcgccttcttcgagcgctacgtggacagcaacttcaccgcc
gcgctggaggagaagctcgacgacatcagcggcgggcgcgccgactggcgggaggtcatg
gccgagttctgggatgccttctccaaggccgtggccgcgaccaaggacctcaagatcagc
gacgtgatcgacgcgctggacgaggatctggggccgcacttcttcccgccggccgatgac
ggcaaggacccgcgcgaatgcccgaactgccataccgggcggctcggcctgcggctggga
aagacgggcgccttcatcggttgctcgaactacccggaatgccgctacacccgcccgctg
atcgccccgggcgccgagggcgacgaggcggcgggcttcgcggacggggtgcgcgagctg
ggcgcgagcccggagggcgtgccggtcaccatgcggcgcgggccctatggcatctatgtc
cagctcggcgagccgggggtggatgccaagggcaagccgaccaagccgcgccgtgccagc
ctgacccggggcatggagccggaaggcgtgacgctggaacgcgccctcgccctgctctcc
atgccgcgcatcgtcggggtgcatcccgagacgggcgaggagatcaccgcgcatctcggc
cgcttcggtccctatctgaccatgggcacgctctccaagtcgctcgacaaggatgacgac
gtgctgaccatcgggctgaaccgcgccgtggcgctgctggccgaggccaagccgcgttcc
gtggtgctgggcgagcatccgaaggataacgcgccggtggagatccggcgcgggcgcttc
ggcccctatgcccagcatggccagaccgtggccagcctgccgcgcaatgtccaggtggag
gatttcaccctggagcaggcggtggcgctgctggccgagaagggcaagcagctcgcgccc
aaggggaaggcgggagcaaagggcaaggccaaggcaacggcgaagaaggcggcggcgaag
cccgccgccgaagccggggaggagaagaaacccgccgcgaagaaggccgcgccgcgcaag
gcggcccccaaggcgccctccaaggcaacggccaagcccgccgctggcaagccggccacc
aagccggcggcgcgcaagaccgccaaggcctga
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