Roseomonas gilardii: RGI145_13645
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Entry
RGI145_13645 CDS
T04615
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RGI145_13645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rgi03021
]
RGI145_13645
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_13645
Enzymes [BR:
rgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RGI145_13645
Transcription machinery [BR:
rgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RGI145_13645
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RGI145_13645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
APT58006
UniProt:
A0A1L7AGT1
LinkDB
All DBs
Position
1:complement(3005592..3006608)
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AA seq
338 aa
AA seq
DB search
MLDRNWRSLIKPERLDVDPGADPARVATVVAEPLERGFGQTLGNALRRVLLSSLQGAAVT
AVKIEGALHEFSSLQGVQEDVTDIILNIKQLAIRMPSEGTKRLTLEATGPGEVTAGQIQV
TGDIEVANPELVICTLDDGARFSMELTVSTGKGYVPASENRTEDQEIGVIPVDAIYSPVR
RVAFQVQPTRVGQRTDYDKLVLTVETDGTVAPDDAVALAARILQDQLQLFINFDEPREAK
VQEVQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRKS
LNEIKEVLASMGLSLGMNVPGWPPENIEDLARRVEEPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctggatcgcaattggcgttccctgatcaagcccgagcgcctggacgtcgatccgggt
gctgaccccgcgcgcgtggccaccgtggtcgccgagccgctggagcgcggtttcggtcag
actctgggcaacgcgctgcggcgggttctgctgtcctcgctccagggcgcggccgtcacg
gccgtgaagatcgagggcgcgctgcatgagttcagcagcctgcagggtgtgcaggaggat
gtcaccgacatcatcctgaacatcaagcagctggccatccgcatgccctccgagggcacg
aagcgcctgacgctggaggccaccggccccggcgaggtgacggcgggccagatccaggtg
accggcgacatcgaggtcgccaacccggagctggtgatctgcacgctcgacgatggggcg
cgcttctccatggaactcaccgtttcgacgggcaagggctatgtccccgcctccgagaac
cggaccgaggaccaggagatcggcgtgatcccggtggacgcgatctactcgcccgtccgc
cgcgtcgccttccaggtgcagccgacccgtgtcggccagcgcacggattacgacaagctc
gtgctcacggtggagacagacggcacggtcgcgccggatgacgcggtggcgctcgccgcc
cgcatcctgcaggaccagctgcagctcttcatcaacttcgacgagccgcgcgaggccaag
gtgcaggaggtgcaggacgacctgcccttcaaccgcaacctgcttcgcaaggtcgatgag
ctggagctgtcggtccgcagcgcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctcgtgcagaagtccgagcaggagatgctgcgcaccccgaacttcgggcgcaaatcc
ctgaacgagatcaaggaggttctggcctccatgggtctcagcctcgggatgaacgtgccg
ggctggccgcctgagaacatcgaggacctggctcgccgggtcgaagagcccttctga
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