Roseomonas gilardii: RGI145_14050
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Entry
RGI145_14050 CDS
T04615
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
rgi
Roseomonas gilardii
Pathway
rgi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RGI145_14050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_14050
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RGI145_14050
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
HHH
GIY-YIG
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
APT58069
UniProt:
A0A1L7AH96
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All DBs
Position
1:3079237..3081141
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AA seq
634 aa
AA seq
DB search
MAFAHEESAPLAPMEGREVIEKALATLPLSPGVYRMLDAKGDALYVGKARQLRKRVYNYT
QVARLPDRLKRMVFETRSLEVITTASEAEALLLEANLIKRLRPRFNIVLRDDKSYPWLVI
TEDHAYPQIGKHRGERRKGASYWGPFASAWAVNQTLTALQRVFLLRSCRDSVFENRDRPC
LLYQIRRCSAPCVGRISEADYADLTRQAKQFLSGETPSIQKKLAHEMEEAAEALEFERAA
AIRDRIRGLTHVQGRDRINMEGVGDADIVAVHQAAGQCCVQVFFFRGGRNNGNRAFFPSH
ARQDIPPGEVLEAFLAQLYDDLPPPPLVLLSHDIPEPALLAEALTLKAGRKVEIHRPQRG
DKRAAVEHAATNAREALERKLAEGTAQTALLEGVAKIFDLSSIPERIEIYDNSHIQGANA
YGVMVVAGPGGFIKPAYRKFSIKGPVTPGDDFAMMREVFERRFARALKEDPEREQGSWPD
LVLIDGGLGQLNAARDILAEMGVDDVPLVAVAKGPDRDAGREWFHRTGHAPFQLPPRDPV
LYYLQRLRDEAHRFAITTHRAGRSKALVKSELDEVPGVGTALKRRLLNHFGSVRGVRNAG
LEDLENAPGIGPSMARRIYEHFHPGAVASREAAG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgcccacgaagaatccgcccccctcgcccccatggaaggccgcgaggtcatc
gagaaggccctggctaccctgccgctctcgccgggcgtgtaccgcatgctcgatgccaag
ggcgatgccctctatgtcggcaaggcccgccagctccgcaagcgcgtgtacaactacacc
caggtcgcccgcctcccggaccggctgaagcgcatggtcttcgagacccgttccctggag
gtgatcaccaccgcctccgaggccgaggcgctgctgctcgaagccaacctgatcaagagg
ctccgcccgcgcttcaatatcgtcctgcgcgacgacaagtcctatccctggctcgtcatc
accgaggatcacgcctacccgcagatcggcaagcaccggggggagcggcgcaagggcgcc
tcctactggggacccttcgcctccgcctgggcggtgaaccagacactgaccgcgctgcag
cgcgtcttcctgctccgctcctgccgcgacagcgtcttcgagaaccgcgaccgcccctgc
ctgctctaccagatccgccgctgctccgccccctgcgtcgggcggatcagcgaggccgac
tacgccgacctcacccgccaggcgaagcagttcctttctggcgaaaccccctctatccag
aagaagctggcgcacgagatggaggaggccgccgaggccctggaattcgagcgcgccgcc
gccatccgcgaccgcatccgcggcctgacgcatgtccagggccgcgaccgcatcaacatg
gagggcgtgggcgacgccgacatcgtcgccgtccaccaggccgccggccagtgctgcgtg
caggtcttcttcttccgcggcgggcgcaacaacggcaaccgagctttcttcccctcccat
gcccggcaggacatcccgcccggcgaggtgctggaggccttcctggcccagctctacgac
gacctgccgcccccgccgctggtgctgctgagccacgacatccccgagcccgccctgctg
gccgaggccctcaccctcaaggccggccgcaaggtcgagatccaccgcccccagcgcggc
gacaagcgtgccgccgtggaacacgccgccaccaacgcgcgggaggcgctggagcgcaag
ctggccgagggcaccgcccagaccgccctgctggaaggcgtggcgaagatcttcgacctg
tcttccatcccggagcgcatcgagatctacgacaacagccatatccagggcgccaacgcc
tatggcgtgatggtggtcgccggccccggcggcttcatcaagcccgcctaccgcaagttc
tccatcaagggccccgtcaccccgggcgacgacttcgccatgatgcgggaggtcttcgag
cgccgtttcgcccgcgccctgaaggaggacccggagcgcgagcagggctcctggcccgac
ctcgtgctcatcgatggcggactcggccagctcaatgccgcccgcgacatcctggcagag
atgggcgtggacgacgtccccctggtcgccgtggccaaggggcccgaccgtgacgccggc
cgcgaatggttccaccgcaccgggcatgcccccttccagctcccgccccgtgacccggtg
ctctactatctccagcgcctgcgcgacgaagcgcaccgcttcgccatcaccacccaccgc
gccggccgctccaaggccctggtgaaatcggagctggacgaggtgcccggcgtcggcacc
gcgctgaagcgccgcctgctcaaccatttcggctccgtccgcggcgtccgcaacgcggga
ctcgaggatctggagaacgcccccggcatcggcccctccatggcgcgccgcatctacgag
cacttccatcccggcgcagtggcgtcccgcgaggcagccgggtag
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