Roseomonas gilardii: RGI145_14540
Help
Entry
RGI145_14540 CDS
T04615
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGI145_14540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgi03400
]
RGI145_14540
Enzymes [BR:
rgi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RGI145_14540
DNA repair and recombination proteins [BR:
rgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGI145_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APT58144
UniProt:
A0A1L7AH82
LinkDB
All DBs
Position
1:complement(3183683..3184633)
Genome browser
AA seq
316 aa
AA seq
DB search
MDDAADAQQDGNALREALLAALSLQLGWGVDEALQAAPLDRTAPRPEAAMPGVAASATAW
PAPGRAALPGRDAGSGAGAGEEAGGSLFPGEAVPPPPVPRRPAPRPAEVLVPAALRAADL
AAGADSLEALKAAMERFDASLRDTATNIVFSDGVAESGLMLIGEAPGADEDRLGKPFVGV
SGRLLDRMVASIGLDRARNFYLTNILCWRPPGNRTPTDAEVSLFLPFARRHIALARPRHV
VLLGGTAAKALLGAREGITRLRGRWHRLEIEGLGTVPALATLHPAYLLRQPSAKRESWQD
LLMLRRALDGEVPKGF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgccgcggatgcccagcaggacgggaacgccttacgcgaggcgttgctggcg
gcgctgtcgctgcaactcggctggggggtggacgaggcgctgcaagcggcgccgctcgac
cggacggcgcctcgccccgaggcggccatgcccggcgtggcagccagcgccacggcctgg
cccgcgcccggacgggcggcgttgccgggacgcgacgcggggagcggcgcgggggccgga
gaggaggccggtggcagcctgtttcctggcgaggccgtgccgcccccccctgtgccgcgc
cgcccggcgccccgcccagcggaggtgctggtccccgccgccctgcgcgccgccgatctg
gcggccggcgcggacagcctggaggcgctgaaggcggcgatggagcgtttcgacgccagc
ctgcgcgatacggcgaccaacatcgtcttttccgacggcgtggcggaaagcgggctgatg
ctgatcggcgaggcccccggcgccgacgaggaccggctgggcaagcctttcgtcggcgtc
tcggggcggctgctggaccgcatggtggcgagcatcggcctcgaccgcgcccgcaacttc
tacctcaccaacatcctctgctggcggccaccggggaaccgcacgcccacggacgcggag
gtctcgctcttcctgcccttcgcccggcggcatatcgccctggcgcgcccgcggcatgtc
gtcctgctgggcggcacggcggccaaggccctgctgggcgcgcgggagggcatcacccgc
ctgcgcggccgctggcatcggctggagatcgaggggctgggcacggttccggccctggcg
acgctgcacccggcctatctgttgcggcagccttcggccaagcgggaaagctggcaggac
ctgctgatgttgcgccgggccctggatggcgaggtgcccaaggggttctga
DBGET
integrated database retrieval system