Roseomonas gilardii: RGI145_16045
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Entry
RGI145_16045 CDS
T04615
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi00020
Citrate cycle (TCA cycle)
rgi00190
Oxidative phosphorylation
rgi00650
Butanoate metabolism
rgi00720
Other carbon fixation pathways
rgi01100
Metabolic pathways
rgi01110
Biosynthesis of secondary metabolites
rgi01120
Microbial metabolism in diverse environments
rgi01200
Carbon metabolism
Module
rgi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rgi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rgi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGI145_16045
00650 Butanoate metabolism
RGI145_16045
09102 Energy metabolism
00190 Oxidative phosphorylation
RGI145_16045
00720 Other carbon fixation pathways
RGI145_16045
Enzymes [BR:
rgi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RGI145_16045
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
YneP
Motif
Other DBs
NCBI-ProteinID:
APT58395
UniProt:
A0A1L7AI08
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All DBs
Position
1:3543040..3544854
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AA seq
604 aa
AA seq
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MNAISKPGIGGAAYRVVDHTYDVVVVGAGGAGLRSTFGMGAAGLKTACITKVFPTRSHTV
AAQGGIGAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIEYMCREAVPSIIELEHYGVPFS
RTEDGKIYQRPFGGHMQNYGKTPAMRACAAADRTGHAILHTLYQQSLKHNCEFFVEYFAL
DLIMEEGACRGVMAWCLEDGSIHRFRAQTVVLATGGYGRAWFSCTSAHTCTGDGGGMVLR
AGLPLQDPEFVQFHPTGIYGSGCLVTEGARGEGGYLTNSEGERFMERYAPTAKDLASRDV
VSRAMSMEIREGRGVGPKKDHIHLHLEHLGAELLHERLPGISETAKIFAGVDVTKEPIPM
LPTVHYNMGGIPTNIHCEVLNPTADDQDRVVPGLMAVGEAACVSVHGANRLGTNSLLDLV
VFGRAAAHRAAETVKPGATQAPLPADAGDASLSRLDGVRNAKGGTSVAALRERMQRTMQS
HAAVFRTSDSLKEGVDKMQTVYDGLSDIRIHDRSLVWNSDLMEALELHNLMGNAMCTMVS
AEARHESRGAHAHEDYPERDDVNWLKHTIATCDSNGLVKLDYRDVKMRTLTNEVQVFPPK
PRVY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcagcaagccgggaatcggcggcgcggcctaccgggtggtggaccatacc
tatgacgtcgtggtggtgggggccggcggcgccgggctgcgctccaccttcggcatgggc
gccgcgggcctgaagacggcctgtatcaccaaggtcttccccacccgctcccacaccgtg
gcggcgcagggcggcatcggcgccgcgctgggcaacatgggcgaggacgactggcgctgg
cacatgtacgacaccgtgaaggggtcggactggctcggcgaccaggacgccatcgagtac
atgtgccgcgaggccgtgccctcgatcatcgagctggagcactatggcgtgccgttctcc
cgcaccgaggacggcaagatctaccagcggcccttcggcggccacatgcagaactacggc
aagacccccgcgatgcgcgcctgcgccgcggccgaccgcaccggccatgccatcctgcac
acgctctaccagcagtcgctgaagcacaactgcgagttcttcgtcgaatacttcgccctc
gacctcatcatggaggaaggcgcctgccgcggcgtgatggcttggtgcctggaggacggc
tccatccaccgcttccgtgcccagaccgtggtgctcgccaccggcggctatggccgcgcc
tggttctcctgcacctccgcccacacctgcacgggcgatggcggcggcatggtgctgcgc
gccggcctgccgctgcaggacccggaattcgtgcagttccacccgaccggcatctacggc
tccggctgcctcgtgaccgaaggcgcgcgcggcgagggcggctacctcaccaattccgag
ggcgagcgcttcatggagcgctacgcgccgaccgcgaaggacctcgcctcgcgcgacgtc
gtctcgcgcgccatgtcgatggagatccgcgagggccgcggcgtcggcccgaagaaggac
cacatccacctgcacctggagcatctgggcgccgagctgctgcatgagcgcctgccgggc
atctccgagacggcgaagatcttcgccggcgtggacgtgaccaaggagccgatcccgatg
ctgccgaccgtccactacaacatgggcggcattcccacgaacatccattgcgaggtgctg
aacccgacggcggacgaccaggaccgcgtggtccccggcctgatggcggtgggcgaggcg
gcctgcgtctccgtgcacggcgccaaccgcctcggcaccaactcgctgctcgacctcgtg
gtcttcggccgcgccgccgcgcaccgcgccgccgagacggtcaagccgggcgcgacccag
gcgccgctgccggcggatgcaggcgatgcctcgctctcccgcctcgacggcgtgcgcaac
gccaagggcggcaccagcgtcgccgcgctgcgcgaacgcatgcagcgcacgatgcagagc
cacgcggcggtgttccgcacctccgacagcctgaaggaaggcgtggacaagatgcagacg
gtctatgacggcctgtccgacatccgcatccacgaccgctccctggtctggaacagcgac
ctgatggaggcgctggagctgcacaacctgatgggcaacgccatgtgcaccatggtcagc
gccgaggcgcgccacgagagccgcggcgcccatgcccacgaggactatcccgagcgcgac
gacgtgaactggctgaagcacaccatcgccacctgcgacagcaacggcctcgtcaagctc
gactaccgcgacgtgaagatgcgcaccctcacgaacgaggtccaggtcttcccgcccaag
ccgcgcgtgtactga
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