Roseomonas gilardii: RGI145_17420
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Entry
RGI145_17420 CDS
T04615
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rgi
Roseomonas gilardii
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgi03016
]
RGI145_17420
Enzymes [BR:
rgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RGI145_17420
Transfer RNA biogenesis [BR:
rgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RGI145_17420
Prokaryotic type
RGI145_17420
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
APT59450
UniProt:
A0A1L7AL22
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All DBs
Position
1:3877521..3878453
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AA seq
310 aa
AA seq
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MDGWLIIDKPSGIGSTEVVNRVKRAFNAQKAGHGGTLDPLATGLLPVAFGSATKTVPYVM
DGTKAYHFTLRFGEARDTDDADGQVTATSDLRPTDEEIRAALPQFRGEIMQVPPAYSAIK
VDGQRAYDLAREGAPPVLMPRPARVDKFELIARPDADTAIFAVESGKGVYMRSLARDLAR
AVGTVGHIATLRRLRVGPFLESHAVSLDSLTVTGDAPPPSPDLLLPVMTALADIPALAVT
EAEAARLSFGQDISLVEFMGRVPDGANLEGGLVRVVTGGRLVGLAMLKDGLVRPERWLIR
SEPVHDQTEG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ctggatggctggctgatcatcgacaagccctcgggcatcggcagcaccgaggtggtgaat
cgcgtcaagcgcgccttcaacgcgcagaaggccgggcatggcggaacgctggacccgctg
gcgaccgggctgctgccggtggccttcggctcggccaccaagaccgtcccctacgtgatg
gacggcaccaaggcctatcacttcacgctgcgcttcggcgaggcgcgcgacacggacgat
gccgacgggcaggtgaccgcgaccagcgacctccgcccgacggacgaggagatccgggcc
gccctgccgcagttccgcggcgagatcatgcaggtcccgcccgcctattccgccatcaag
gtggacgggcagcgcgcctatgacctggcgcgcgagggcgcgccgccggtgctgatgccg
cgcccggcccgggtggacaagttcgagctgatcgcccgccccgatgccgacaccgcgatc
ttcgcggtggaaagcggcaagggcgtctacatgcgttcgctcgcccgcgacctcgcccgc
gcggtgggcacggtcgggcatatcgccacgctgcgccgcctgcgcgtggggcccttcctg
gagtcgcatgcggtttcgcttgacagcctgaccgttacgggcgatgccccgcccccttcc
ccggatcttcttcttcccgtcatgaccgcgctggccgacatcccggctctggccgtgacc
gaagcggaggccgcccgcctttccttcggccaggacatctccctggtcgagttcatgggc
cgggttcccgacggcgccaacctcgaagggggtctggtgcgcgtggtgacgggggggcgc
ctggtggggctggcaatgctcaaggacggtctcgtccgtcccgagcgctggctgatccgg
agcgaacccgtccacgaccagacagaaggttga
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