Roseomonas gilardii: RGI145_19950
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Entry
RGI145_19950 CDS
T04615
Name
(GenBank) peptidase M20
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi00300
Lysine biosynthesis
rgi01100
Metabolic pathways
rgi01120
Microbial metabolism in diverse environments
rgi01230
Biosynthesis of amino acids
Module
rgi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGI145_19950
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rgi01002
]
RGI145_19950
Enzymes [BR:
rgi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RGI145_19950
Peptidases and inhibitors [BR:
rgi01002
]
Metallo peptidases
Family M20
RGI145_19950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
APT59613
UniProt:
A0A1L7ALG6
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All DBs
Position
2:complement(115721..116956)
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AA seq
411 aa
AA seq
DB search
MMSHQDSIRAFLDGEQGAQADFLAELVRMPSDNPPGDCRPHAERTAELLRALGYEVELHA
VPEALVRAHGMISVTNLVVRRRLGSGEGPVIALNAHGDVVPPGEGWTRDPYGAEVVDGWM
YGRGVAVSKSDFATYVWALRALEASGAPLSGTVELHLTYDEEAGGEVGPGFLLSEGISKP
DLVLSAGFSYNVVTAHNGCLHLEVEVNGRSAHAAMPFTGVDALEAATAILSTLYDWRKGL
AAKTSAITGIGSPQLTVGLIKGGINTNVVPDRVTLRLDRRMIPEENPAEAEAELRQVIAD
AAAAFPKARVEVRRILLAEPLKPLPGGERLVEALCRHASEVMGEPITAKGVPLYTDARLY
SAHGIPAALYGAGPRTIEDANAHRADERLPLSDLRKATEVVALTLAELLAA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcccaccaggattcgatccgcgccttcctcgatggggaacagggcgcccaggcg
gatttcctcgccgaactggtcaggatgccctccgacaacccgccgggcgactgccgaccg
catgccgagcgcaccgcggaactgctgcgcgccctcggctacgaggtggagctgcacgcc
gtgccggaagcgctggtgcgggcccatggcatgatcagcgtcaccaacctcgtggtgcgc
cgccgcctcggttcgggggaggggccggtgatcgccctcaacgcccatggcgacgtcgtg
ccgcccggcgagggctggacccgcgacccctatggcgccgaggtggtggacggctggatg
tatggccgcggcgtcgccgtgtcgaaatccgacttcgccacctatgtctgggcgctccgg
gcgctggaagcctcgggcgcaccgctgtccggcacggtggaactgcacctgacctatgac
gaggaagcgggcggcgaggtcgggccgggcttcctgctgagcgaaggcatctcgaagccc
gacctcgtgctgagcgccggcttctcctacaacgtggtcaccgcccataacggctgcctg
cacctggaggtggaggtgaacggccgttccgcccatgccgccatgcccttcaccggcgtg
gatgcgctggaggccgccacggcgatcctgtccaccctctacgactggcggaaggggctg
gccgcgaagacctccgccatcacgggcatcggctcgccgcagctcacggtcgggctgatc
aagggcggcatcaacaccaatgtcgtgcccgaccgcgtcaccctccggctcgaccgccgc
atgatccccgaggagaacccggccgaggcggaggcggagctgcgccaggtcatcgccgat
gccgccgcggccttcccgaaggcccgggtcgaggtgcgccgcatcctgctggccgagccg
ctgaagccgctgccgggcggcgagcggctggtcgaggccctgtgccgccatgccagcgag
gtcatgggcgagccgatcaccgccaagggcgtcccgctctacaccgatgcgcgcctttac
tcagcccatggcatccccgccgcgctctatggcgccgggccccggaccatcgaggacgcc
aatgcccatcgcgccgatgagcggctgccgctcagtgacctgcgcaaggcgaccgaggtg
gtggcgctgaccctggcggaactgctggccgcctga
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