Roseomonas gilardii: RGI145_21275
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Entry
RGI145_21275 CDS
T04615
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi00330
Arginine and proline metabolism
rgi00480
Glutathione metabolism
rgi01100
Metabolic pathways
rgi01110
Biosynthesis of secondary metabolites
rgi04148
Efferocytosis
Module
rgi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RGI145_21275
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RGI145_21275
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RGI145_21275
Enzymes [BR:
rgi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RGI145_21275
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APT59841
UniProt:
A0A1L7AM39
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All DBs
Position
2:416816..419152
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AA seq
778 aa
AA seq
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MEYARRFKFLVCAPAFDEADLEGARLRQILTEIEGMGYAVLRARRDEDAELVVRTDAAIG
CVVVDWGKKGLQGKAAALISLVRRRGTEVPIFLLVRRRRLEDIPVDVLDDVDGFVFLAEE
TPEFIAKNLVSRLRQYAETLKTPFFGALVDYAEQGNQLWTCPGHNGGMFYSRSPIGRIFV
EHLGEAVFRDDLDNSVLQLGDLLTHEGPALAAQREAAKIFGAERTYFVLNGTSTSNKIAL
NALLAEGDLVLFDRNNHKAAHHGALFLSGALPIFVETARNPHGLIGPMRKDALSEERLRE
AIRTNPLVSDAEAWRRPRPFRAAVIEQCTYDGTIYSAEEVLNSIGHLCDYILFDEAWAGF
MKFHPLFRGRFGMGLEKLGPDAPGILVTQSTHKQLASFSQASQIHVKDSHLGEQRRRVGH
RRFNEMYLLHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTVRLGIEMRKKLRFTAREM
AEKEPDPTRRWFFEPFVPKTVRLDGVPTPWEEVPTDLLAVNPGHWEFRPGEDWHGFGDVP
AGWAMTDPNKLTVLTPGFTDGGYAQHGVPAPVVAEYLRQNRIVPEKNDLNSLLFLLTPGS
ESSKAGTLLSHLVTFKKLHDQNAPLEEVIPGFVARRPKRYAGLRLRELCAEMHDFYRAQD
VSGLQAAQFQAGHFPDMVMPPHEAVRELVRNRVDYVPLDECFGRVAVTLWLVYPPGIATV
IPGERLGEASRPMIDYLKAFERAANRFPGFENEIQGLYRETDSGGQVRFYTYVLREAS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgcccgtcgtttcaagttcctggtctgtgctccggctttcgacgaggccgat
ctggagggtgcccggctgcggcagatcctcaccgagatcgagggcatggggtatgccgtg
ctgcgggcgcggcgggacgaggatgccgagctggtggtccgcaccgatgctgcgatcggc
tgcgtggtggtggactggggaaagaaaggccttcaaggcaaggcggcggctctgatctcg
ctggtccggcgccgggggacggaggtgccgatcttcctgctggtgcgccgccggcggctg
gaggacatcccggtcgatgttctggacgatgtcgacggcttcgtcttcctggcggaagaa
acgccggagttcatcgccaagaacctcgtctcccggctgcggcaatatgccgagacgctg
aagacgccgttcttcggggcgctggtcgattacgccgagcagggcaaccagctctggacc
tgcccgggccataatggcggcatgttctacagccgcagcccgatcggacggatcttcgtc
gagcatctgggcgaggcagtgttccgcgacgacctcgacaactcggtgctgcaactcggc
gacctgctgacgcatgaggggccagccctggcggcacagcgggaggcggcgaagatcttc
ggagccgagcgcacctatttcgtgctgaatggcacctccacctccaacaagatcgcgctg
aacgccctgctggccgagggcgacctggtgctgttcgaccgcaacaaccacaaggcggca
catcacggcgcgctcttcctcagtggtgcgctgccgatcttcgtggagacggcgcgtaac
ccgcatgggctgatcgggccgatgcggaaggacgcgctgtcggaggaacgtctgcgtgag
gcgattcgcaccaacccgctggtgagtgatgccgaagcctggcgccggccgcgccctttc
cgcgccgccgtgatcgagcagtgcacctatgacggcacgatctattccgccgaggaggtg
ctgaacagcatcggccatctctgcgactacatcctcttcgacgaggcctgggcgggcttc
atgaagttccacccgctcttccgcggccgcttcggcatggggctggagaagctgggaccc
gacgcgccgggcatcctggtgacacagagcacccacaagcagctcgccagcttctctcag
gcctcgcagatccatgtgaaggacagccatctcggcgagcagcggcgtcgcgtcgggcac
cgccgcttcaacgagatgtatctgctgcacgcctccaccagtcctttctacccgctcttc
gcctcgctcgacgtgggtgcgcagatgatgaagggccgttccggcgaggtgctgtgggac
gataccgtccgcctcggcatcgagatgcgcaagaagctacgcttcaccgcgcgcgagatg
gcggagaaggagccggacccgacgcgccgctggttcttcgagcccttcgtgccgaagacc
gtgcggctggatggcgtccccaccccctgggaggaggtgccgaccgatctcctggccgtc
aaccccgggcactgggagttccgcccgggcgaggactggcacggtttcggcgatgtgccg
gcgggatgggcgatgaccgatccgaacaagctgacggtgctgacgccgggcttcaccgat
ggcggctatgcccagcatggcgtcccggcgcccgtggtggcggaatacctgcgccagaac
cggatcgtgccggagaagaacgacctgaacagcctgctcttcctgctgacgccaggcagc
gaaagcagcaaggcggggacgttgctgtcccatctggtcaccttcaagaagctgcatgac
cagaacgcgccgctggaggaggtcatccccggcttcgtcgctcggcgtccgaagcgctat
gccggcctgcgcctgcgtgagctttgcgcggagatgcatgatttctacagggcccaggat
gttagcgggctgcaggcggcgcagttccaggccgggcatttcccggacatggtgatgccg
ccgcacgaggcggtgcgggaactggtgcgcaaccgggtggactacgttccgttggacgag
tgcttcggtcgtgtcgcggtcacgctttggctggtctatccgcctgggatcgccacggtg
attcccggggagcggctgggcgaggcgtcgcggccgatgatcgactacctgaaggccttt
gagcgggcggcgaaccgttttcccggcttcgagaacgagatccagggcctctatcgcgaa
accgattcgggcggacaggtgcgcttctacacctatgtgttgcgcgaggcgtcctga
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