Rhodanobacter glycinis: CS053_02990
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Entry
CS053_02990 CDS
T06136
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CS053_02990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgl03400
]
CS053_02990
Enzymes [BR:
rgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CS053_02990
DNA repair and recombination proteins [BR:
rgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CS053_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
Zn_ribbon_6
PIF1
CaATP_NAI
AAA_22
TrwB_AAD_bind
DUF3638
Motif
Other DBs
NCBI-ProteinID:
QEE23591
UniProt:
A0A5B9DYF8
LinkDB
All DBs
Position
complement(723556..725724)
Genome browser
AA seq
722 aa
AA seq
DB search
MPAVLRVALPVPLPSLFDYLPPATGQAVPGSRVLVPFGRGKAVGVVVDVAADSAIGKSRL
KPAIQALDDAPLLDAELMRSLAWAADYWLGAPGEAYANALPLALREPRPLPDTRDETWAL
TVAGQSALDAGSRRGGSRDLLQALVAIPLAATELSERLPGWRTAARRLAPAGLIERVAAR
SVATAVTTAPALNDEQQAAVAAVASMLGQFQPFLLDGVTGSGKTEVYLALIAQALAQGRQ
ALLLVPEIGLAPQTVRRLRERLGVPVEVLHSNLSEGDRARAWLRARNGEARVILGTRSAV
FTPLPQAGILIVDEEHDGAYKQQDGFRYHARDLAVVRARALGVPVLLGSGTPSLESLANV
VAGRYRGLHLRTRPGALRPPQVQIVDMRAQRLEHGLSPTLLSAVADTVARGEQVLVFKNR
RGYAPVLLCYQCSWHADCPRCERPMTLHVGRRQLICHHCDHRAPVPTVCPSCGATELKPQ
GQGTERLEEALTAQFPTVPVLRIDRETTRRRDTFEQLLDGLRNDAPAILVGTQMLAKGHD
LPNLTLVAIVGVDEGLLSVDFRAGERLAQTVVQVAGRAGRAAKPGRVLLQTHHPDHPLLR
QLLAQGYAAAAQELLAERRLALLPPFSHQALLRAEAHQRGHVDAFLHAANAALPAGHPLQ
VAGPMPAPMPLRAGRHRGQLLLEGDSRSALHEVLRAWQSTLFALPAARRVRWSLDVDPVD
LY
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgtactccgcgtcgccctgccggttcccctgcccagcctgttcgactacctg
ccgcccgccacgggccaggcggtgccgggcagccgcgtgctggtgccgttcgggcggggc
aaggcggtgggcgtggtggtcgacgtggcggcggacagcgcaatcggcaagtcgcggctc
aagcctgcgatccaggcgctggacgacgcgccactgctcgatgccgaactgatgcgcagc
ctggcctgggccgccgactactggctcggcgcccccggcgaggcctacgccaacgcgctg
ccgctggccttgcgcgaacctcgcccactgcccgatacccgcgacgaaacctgggcactg
accgtggccggtcagagcgcactggatgccggcagtcgccgcggtggcagtcgcgacctg
ttgcaggcgctggtcgccataccgctggcggccaccgaattgagcgagcgcctgcccggt
tggcgcaccgccgctcgccgactggcaccggccgggctgatcgaacgcgtcgccgcacgt
tccgtcgccaccgccgtcaccaccgctcccgccctgaacgacgaacagcaggccgcagtc
gccgccgtggccagcatgctcggccagttccagcccttcctgctcgacggcgtcaccggc
agcggcaagaccgaggtctatctggcgctgatcgcccaggcattggcgcaaggccggcag
gcgttgctgctggtgcccgagatcgggctggcgccgcaaaccgtgcgtcgcctgcgcgaa
cggctgggcgtaccggtggaggtgctgcattccaacctgtccgagggcgaccgcgcgcgc
gcctggctgcgcgcacgcaacggcgaggcgcgggtcatcctcggcacccgctcggccgtg
ttcacgccattgccgcaggccggcatcctgatcgtggacgaggaacacgacggcgcctac
aaacagcaggacggcttccgctaccacgcgcgcgacttggccgtggtgcgcgcccgcgcg
ctgggcgtgccggtgctgctgggctcgggcacgccgtcgctggaatcgctggccaacgtc
gtcgccggtcgctatcggggattgcacctgcgtacgcgccccggcgcgctgcgaccgccg
caggtgcagatcgtggacatgcgcgcacagcgtctcgaacatggcttgtcgcccaccctg
ctcagcgcggtggcggacacggtggcgcgcggcgaacaggtgctggtgttcaagaaccgg
cgcggttacgccccggtgctgctgtgctaccagtgcagctggcacgccgattgcccgcgc
tgcgaacggccgatgactttgcatgtcggccggcgccagctgatctgccaccactgcgac
caccgcgcaccggtaccgacggtctgcccgtcctgcggcgcgacggagctgaagccgcaa
ggccagggcaccgagcggctggaagaagcgctgaccgcgcaattccccaccgtgccggtg
ctgcgcatcgatcgcgaaaccacccgccgtcgcgacaccttcgaacagttgctcgacggc
ctgcgcaacgatgcgcccgccatcctggtcggcacccagatgctggccaagggccacgac
ctgcccaacctcaccctggtcgccatcgtcggcgtggacgagggcctgctcagcgtggat
tttcgcgctggcgaacggctggcgcagaccgtggtgcaggtggcaggacgcgccggacgc
gcggccaaacccggtcgcgtgctgttgcaaacccatcatcccgatcatccgctgctgcgc
cagttgctggcccagggctacgccgccgctgcgcaggaactgctggccgagcgccggctg
gccctgctgccgccgttcagtcatcaggcgctgctgcgggccgaggcgcaccagcgcggc
cacgtcgatgcgttcctgcatgcggccaacgccgcattgccggcgggtcacccgctgcag
gtcgccggcccgatgccggcgccgatgccgctgcgcgccggtcgtcatcgcggccaattg
ctgctggaaggcgacagtcgcagcgccctgcacgaggtattgcgcgcctggcaatccacc
ttgttcgcgctgccggcggcgcgacgggtccgctggtcgctggacgtcgatccggtcgat
ctttactga
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