Rhodanobacter glycinis: CS053_03245
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Entry
CS053_03245 CDS
T06136
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl00010
Glycolysis / Gluconeogenesis
rgl00020
Citrate cycle (TCA cycle)
rgl00260
Glycine, serine and threonine metabolism
rgl00280
Valine, leucine and isoleucine degradation
rgl00310
Lysine degradation
rgl00380
Tryptophan metabolism
rgl00620
Pyruvate metabolism
rgl00630
Glyoxylate and dicarboxylate metabolism
rgl00640
Propanoate metabolism
rgl00670
One carbon pool by folate
rgl00785
Lipoic acid metabolism
rgl01100
Metabolic pathways
rgl01110
Biosynthesis of secondary metabolites
rgl01120
Microbial metabolism in diverse environments
rgl01200
Carbon metabolism
rgl01210
2-Oxocarboxylic acid metabolism
rgl01240
Biosynthesis of cofactors
Module
rgl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rgl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rgl_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rgl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rgl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CS053_03245 (lpdA)
00020 Citrate cycle (TCA cycle)
CS053_03245 (lpdA)
00620 Pyruvate metabolism
CS053_03245 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CS053_03245 (lpdA)
00640 Propanoate metabolism
CS053_03245 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CS053_03245 (lpdA)
00280 Valine, leucine and isoleucine degradation
CS053_03245 (lpdA)
00310 Lysine degradation
CS053_03245 (lpdA)
00380 Tryptophan metabolism
CS053_03245 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CS053_03245 (lpdA)
00670 One carbon pool by folate
CS053_03245 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rgl04147
]
CS053_03245 (lpdA)
Enzymes [BR:
rgl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CS053_03245 (lpdA)
Exosome [BR:
rgl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CS053_03245 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
Biotin_lipoyl_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
GIDA
FAD_binding_2
GCV_H
FAD_binding_3
HI0933_like
3HCDH_N
DUF478
RnfC_N
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
QEE23636
UniProt:
A0A5B9E075
LinkDB
All DBs
Position
784571..786424
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AA seq
617 aa
AA seq
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MANTIEIKIPDIGGHDNVPVIEVLVKAGDTVSKDQSLITLESDKATMEIPSSADGVIKEL
KLKVGDEVSEGTVIAVLETDASGTDTASPSPQRGEGRGEGASSPQSGDEAKAAGNSAAST
RPSPQSSPQRGEEAKAPQAAASTGKSADIECKLVVLGSGPGGYSAAFRAADLGVDTVLVE
RYATIGGVCLNVGCIPSKALLHAAAVIDEAEAIGAHGISFGKPKIDIDKLREFKTKVVGQ
LTGGLAGMAKQRKVRIVQGTGSFVSANEMEVETADGKKLIRFENAIIAAGSQAVRLPMFP
WDDERVMDSTGALELKDVPKKLLVVGGGIIGLEMATVYAGLGSEVTVVEFMDQLIPGADA
DLVKPLAKRIGGKLKGIHLKTKVVSAKATKKGIEVGYEGDSIPDTTVFDRVLVAVGRSPN
GNKIGADKAGVAVTERGFINVDTQLRTNVPHIFAIGDIVGQPMLAHKATHEAHVAAEVVA
GGKSHFDARVIPSVAYTNPEVSWVGVTEREAKEKGLKVGVGKFPWAASGRAIGIDRTEGF
TKLIFDEETHRIVGAGIVGVNAGELISELALAIEMGAEAADIALTVHPHPTLGESVGMAA
EVYEGTITDLYMPKKKK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaccatcgaaatcaagattccggatatcggcggccacgacaacgtgccggtg
atcgaagtgctggtgaaggccggcgacacggtgagcaaggaccagagcctgatcaccctg
gaatcggacaaggcgaccatggagattccctccagcgccgacggcgtgatcaaggagctg
aagctcaaggtcggtgacgaggtgtccgaaggcacggtgattgccgtgctcgagaccgac
gccagcggaaccgacacagcctctccttctccccagcggggagagggtcggggtgagggg
gcgagctcgccgcagtctggcgacgaagcgaaagcggctggcaactctgccgcgagcacc
cgcccctcacctcaatcctctccccagcggggagaggaggcgaaggcgccgcaagcggca
gcttctaccggaaagtcggccgacatcgagtgcaagctggtggtgctgggctccggcccc
ggcggctattccgccgccttccgcgccgccgacctgggcgtggataccgtgctggtggaa
cgctacgccaccatcggcggcgtctgcctcaacgtgggctgcatcccgtccaaggcgctg
ctgcatgccgccgcggtgatcgacgaggccgaggccatcggcgcgcacggcatcagcttc
ggcaagccgaagatcgatatcgacaagctgcgcgagttcaagaccaaggtagtcggccag
ctcaccggcggcctggccggcatggccaagcagcgcaaggtgcgcatcgtgcagggcacc
ggcagtttcgtctcggcgaatgaaatggaagtggagacggccgacggcaagaaactgatc
cgcttcgagaacgccatcatcgccgccggttcgcaggcggtgcgcctgccgatgttcccg
tgggacgacgagcgcgtgatggattccaccggcgcgctggaactgaaggacgtgccgaag
aagttgctggtcgtcggcggcggcatcatcgggctggaaatggccacggtgtacgcgggc
ctgggcagcgaagtgaccgtggtcgagttcatggaccagcttatccccggcgccgacgcc
gacttggtcaagccgctggccaagcgtatcggcggcaagctcaagggcatccacctgaag
accaaggtggtctcggccaaggcgaccaagaagggcatcgaggtcggctacgagggcgac
agcatccccgacaccaccgtgttcgatcgcgtgctggtggcggtgggccgttcgcccaat
ggcaacaagatcggtgcggacaaggccggcgtggcggtgaccgaacgcggtttcatcaac
gtcgatacgcagctgcgcaccaacgtgccgcacatcttcgccatcggcgacatcgtcggc
cagccgatgctggcgcacaaggccacgcatgaggcacacgtggctgccgaagtggtggct
ggcggcaagagccatttcgacgcgcgggtgattccatccgtggcctacaccaacccggaa
gtgtcctgggtcggcgtgaccgagcgcgaggcgaaggaaaagggtctcaaggtcggcgtg
ggcaagttcccgtgggcggcttccggtcgcgccatcggcatcgaccgcaccgaaggcttc
accaagctcatcttcgatgaggaaacccatcgcatcgtgggcgctggcatcgtcggcgtg
aacgccggcgagctgatctccgaactggcgctggcgatcgagatgggtgccgaggctgcc
gacatcgcgttgaccgtgcacccgcatccgaccctgggtgaatcggtgggcatggctgcc
gaagtctacgaaggcaccatcaccgacctgtacatgccgaagaagaaaaagtaa
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