KEGG   Rhodanobacter glycinis: CS053_03245
Entry
CS053_03245       CDS       T06136                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rgl  Rhodanobacter glycinis
Pathway
rgl00010  Glycolysis / Gluconeogenesis
rgl00020  Citrate cycle (TCA cycle)
rgl00260  Glycine, serine and threonine metabolism
rgl00280  Valine, leucine and isoleucine degradation
rgl00310  Lysine degradation
rgl00380  Tryptophan metabolism
rgl00620  Pyruvate metabolism
rgl00630  Glyoxylate and dicarboxylate metabolism
rgl00640  Propanoate metabolism
rgl00670  One carbon pool by folate
rgl00785  Lipoic acid metabolism
rgl01100  Metabolic pathways
rgl01110  Biosynthesis of secondary metabolites
rgl01120  Microbial metabolism in diverse environments
rgl01200  Carbon metabolism
rgl01210  2-Oxocarboxylic acid metabolism
rgl01240  Biosynthesis of cofactors
Module
rgl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rgl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rgl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rgl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rgl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rgl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CS053_03245 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CS053_03245 (lpdA)
   00620 Pyruvate metabolism
    CS053_03245 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CS053_03245 (lpdA)
   00640 Propanoate metabolism
    CS053_03245 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CS053_03245 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CS053_03245 (lpdA)
   00310 Lysine degradation
    CS053_03245 (lpdA)
   00380 Tryptophan metabolism
    CS053_03245 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CS053_03245 (lpdA)
   00670 One carbon pool by folate
    CS053_03245 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rgl04147]
    CS053_03245 (lpdA)
Enzymes [BR:rgl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CS053_03245 (lpdA)
Exosome [BR:rgl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CS053_03245 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Biotin_lipoyl_2 FAD_oxidored Pyr_redox_3 NAD_binding_8 AlaDh_PNT_C GIDA FAD_binding_2 GCV_H FAD_binding_3 HI0933_like 3HCDH_N DUF478 RnfC_N DAO Thi4
Other DBs
NCBI-ProteinID: QEE23636
UniProt: A0A5B9E075
LinkDB
Position
784571..786424
AA seq 617 aa
MANTIEIKIPDIGGHDNVPVIEVLVKAGDTVSKDQSLITLESDKATMEIPSSADGVIKEL
KLKVGDEVSEGTVIAVLETDASGTDTASPSPQRGEGRGEGASSPQSGDEAKAAGNSAAST
RPSPQSSPQRGEEAKAPQAAASTGKSADIECKLVVLGSGPGGYSAAFRAADLGVDTVLVE
RYATIGGVCLNVGCIPSKALLHAAAVIDEAEAIGAHGISFGKPKIDIDKLREFKTKVVGQ
LTGGLAGMAKQRKVRIVQGTGSFVSANEMEVETADGKKLIRFENAIIAAGSQAVRLPMFP
WDDERVMDSTGALELKDVPKKLLVVGGGIIGLEMATVYAGLGSEVTVVEFMDQLIPGADA
DLVKPLAKRIGGKLKGIHLKTKVVSAKATKKGIEVGYEGDSIPDTTVFDRVLVAVGRSPN
GNKIGADKAGVAVTERGFINVDTQLRTNVPHIFAIGDIVGQPMLAHKATHEAHVAAEVVA
GGKSHFDARVIPSVAYTNPEVSWVGVTEREAKEKGLKVGVGKFPWAASGRAIGIDRTEGF
TKLIFDEETHRIVGAGIVGVNAGELISELALAIEMGAEAADIALTVHPHPTLGESVGMAA
EVYEGTITDLYMPKKKK
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggccaacaccatcgaaatcaagattccggatatcggcggccacgacaacgtgccggtg
atcgaagtgctggtgaaggccggcgacacggtgagcaaggaccagagcctgatcaccctg
gaatcggacaaggcgaccatggagattccctccagcgccgacggcgtgatcaaggagctg
aagctcaaggtcggtgacgaggtgtccgaaggcacggtgattgccgtgctcgagaccgac
gccagcggaaccgacacagcctctccttctccccagcggggagagggtcggggtgagggg
gcgagctcgccgcagtctggcgacgaagcgaaagcggctggcaactctgccgcgagcacc
cgcccctcacctcaatcctctccccagcggggagaggaggcgaaggcgccgcaagcggca
gcttctaccggaaagtcggccgacatcgagtgcaagctggtggtgctgggctccggcccc
ggcggctattccgccgccttccgcgccgccgacctgggcgtggataccgtgctggtggaa
cgctacgccaccatcggcggcgtctgcctcaacgtgggctgcatcccgtccaaggcgctg
ctgcatgccgccgcggtgatcgacgaggccgaggccatcggcgcgcacggcatcagcttc
ggcaagccgaagatcgatatcgacaagctgcgcgagttcaagaccaaggtagtcggccag
ctcaccggcggcctggccggcatggccaagcagcgcaaggtgcgcatcgtgcagggcacc
ggcagtttcgtctcggcgaatgaaatggaagtggagacggccgacggcaagaaactgatc
cgcttcgagaacgccatcatcgccgccggttcgcaggcggtgcgcctgccgatgttcccg
tgggacgacgagcgcgtgatggattccaccggcgcgctggaactgaaggacgtgccgaag
aagttgctggtcgtcggcggcggcatcatcgggctggaaatggccacggtgtacgcgggc
ctgggcagcgaagtgaccgtggtcgagttcatggaccagcttatccccggcgccgacgcc
gacttggtcaagccgctggccaagcgtatcggcggcaagctcaagggcatccacctgaag
accaaggtggtctcggccaaggcgaccaagaagggcatcgaggtcggctacgagggcgac
agcatccccgacaccaccgtgttcgatcgcgtgctggtggcggtgggccgttcgcccaat
ggcaacaagatcggtgcggacaaggccggcgtggcggtgaccgaacgcggtttcatcaac
gtcgatacgcagctgcgcaccaacgtgccgcacatcttcgccatcggcgacatcgtcggc
cagccgatgctggcgcacaaggccacgcatgaggcacacgtggctgccgaagtggtggct
ggcggcaagagccatttcgacgcgcgggtgattccatccgtggcctacaccaacccggaa
gtgtcctgggtcggcgtgaccgagcgcgaggcgaaggaaaagggtctcaaggtcggcgtg
ggcaagttcccgtgggcggcttccggtcgcgccatcggcatcgaccgcaccgaaggcttc
accaagctcatcttcgatgaggaaacccatcgcatcgtgggcgctggcatcgtcggcgtg
aacgccggcgagctgatctccgaactggcgctggcgatcgagatgggtgccgaggctgcc
gacatcgcgttgaccgtgcacccgcatccgaccctgggtgaatcggtgggcatggctgcc
gaagtctacgaaggcaccatcaccgacctgtacatgccgaagaagaaaaagtaa

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