Rhodanobacter glycinis: CS053_03510
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Entry
CS053_03510 CDS
T06136
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl00521
Streptomycin biosynthesis
rgl00523
Polyketide sugar unit biosynthesis
rgl00525
Acarbose and validamycin biosynthesis
rgl00541
Biosynthesis of various nucleotide sugars
rgl01100
Metabolic pathways
rgl01110
Biosynthesis of secondary metabolites
rgl01250
Biosynthesis of nucleotide sugars
Module
rgl_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CS053_03510 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CS053_03510 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CS053_03510 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CS053_03510 (rfbB)
00525 Acarbose and validamycin biosynthesis
CS053_03510 (rfbB)
Enzymes [BR:
rgl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CS053_03510 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
QEE23682
UniProt:
A0A5B9DV87
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Position
complement(845704..846753)
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AA seq
349 aa
AA seq
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MKTCLITGGAGFIGANFALQAVADGLRVVNLDKLTYAGNLDTLASLQGNDRHVFVQGDIG
DRALVAKLLAEYRPDAIVNFAAESHVDRSIDGPAEFVQTNVVGTLGLLECARDYWRGLEG
AAREAFRFLHVSTDEVYGSLGDEGQFTETTAYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLVTAKALAGETLPVYGDGLNIRDWLFVGDHCSAIRRVLDA
GRVGETYNVGGNAERTNITVVKTICALLDQRRPLADGRARESLITYVKDRPGHDRRYAID
SSKLQRELGWKPSQTFESGIAATLDWYLDHQPWVQRVLDGSYRMERLGQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctgcttgatcaccggcggcgccggcttcatcggcgcaaatttcgcgctgcag
gcggttgccgatggcctgcgcgtggtgaatctggacaagctcacctatgccggcaacctc
gacacgctggcttcgctgcagggcaatgaccggcacgtgttcgtgcagggcgacatcggc
gaccgggcgctggtggcgaaactgctggccgagtaccgccccgacgcgatcgtgaatttt
gctgccgagtcgcacgtggaccgctccatcgacggcccggccgagttcgtgcagaccaac
gtggtcggcaccctgggcctgctggaatgcgcacgcgactactggcgcggcctcgaaggc
gcggcccgcgaggcgttccgtttcctgcacgtgtccaccgacgaggtctacggctcgctg
ggcgacgagggccaattcaccgaaaccaccgcctacgcccccaattcgccctactcggcg
tccaaggccgcctccgaccatctggtccgcgcgttccaccatacctacgggctgccggtg
ctgaccaccaattgctcgaacaattacgggccgtaccagttccccgaaaagctcatcccg
ctggtgaccgccaaggcgttggccggtgaaaccctgccggtctacggcgacggcctgaat
atccgcgactggctgttcgtgggtgaccactgctcggcgatccgccgcgtgctggacgcc
ggccgcgtgggcgaaacctacaacgtgggcggcaatgccgagcgcaccaacatcaccgtg
gtgaagaccatctgcgccctgctcgaccagcgccgcccgctggccgatggccgcgcccgc
gagtcgctgatcacctacgtgaaagaccgccccggccacgaccgccgctacgccatcgac
tcgtccaaactgcagcgcgaactgggctggaagccgtcgcagaccttcgaaagcggcatc
gcggccacgctggactggtatctcgaccaccaaccgtgggtacagcgcgtactcgacggc
agctatcgcatggagcgactgggacaatga
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