Rhodanobacter glycinis: CS053_05925
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Entry
CS053_05925 CDS
T06136
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CS053_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgl03019
]
CS053_05925
Enzymes [BR:
rgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CS053_05925
Messenger RNA biogenesis [BR:
rgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CS053_05925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QEE24088
UniProt:
A0A5B9DX77
LinkDB
All DBs
Position
complement(1422785..1424110)
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AA seq
441 aa
AA seq
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MSFESLGLVPTLLRALAEQGYAEPTPIQAAAIPEVLAGHDLLAAAQTGTGKTAAFALPLL
QRLIDAPAATPRRPRVLILTPTRELAAQIDDNLRAYAKYLHVRSAVIFGGVGMGPQINAL
RRGVDVVIATPGRLIDHMQQRNIELSGVDVLVLDEADRMLDMGFLPALKRILTAVPKQRQ
TLLFSATFAAPIKALAMQFMRQPREVSVSPPNTVTQLITHHVHPVDASRKRDLLLHVLSQ
DSRRQTLVFSRTKHGADKLVKFLEVSGLRAAAIHGNKSQNARTRALSDFKSGRVTVLVAT
DIAARGIDIDQLPVVINHDLPMVAEDYVHRIGRTGRAGSEGLALSLVSHDESGLLRDIRK
LLDQDIAITEVPGFEPSTPLRLDAGAPRPKQGQRQPRPPRQNGNGASAQRPHGRGPSNGN
NPHAAGNRKRRRPGGRPAAKA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatcactgggcctcgtgcccacgttgttgcgtgcgctcgccgaacagggc
tacgccgaacccaccccgatccaggcagccgccattcccgaggtgctggccggccacgac
ctgctggccgccgcgcagaccggcaccggcaagaccgccgcgttcgccctgccgctgctg
cagcgactgatcgatgcccccgccgccacgccgcgccgcccacgcgtgctgatcctcacc
ccgacccgtgagctggccgcgcagatcgacgacaacctgcgcgcctatgccaagtacctg
cacgtgcgcagcgcggtgatcttcggcggcgtcggcatgggcccgcagatcaacgcattg
cgccgcggcgtggacgtggtgatcgccaccccgggccgcctgatcgaccacatgcagcag
cgcaacatcgagctctccggcgtcgacgtgctggtactggacgaagccgaccgcatgctc
gacatgggcttcctgcccgcgctcaagcgcatcctcacggccgtgccgaagcagcgccag
acgctgttgttctcggccaccttcgccgcaccgatcaaggcgctggcgatgcagttcatg
cgccagccgcgcgaagtctcggtgagcccgccgaataccgtcacgcagttgatcacccac
cacgtgcatccggtggatgcctcgcgcaagcgcgatctgctgctgcacgtgctgagccag
gacagccgccgccagacgctggtgttcagccgcaccaagcacggtgccgacaagctggtg
aagttcctggaggtgtccggcctgcgcgccgccgcgatccacggcaacaagagccagaac
gcacgtacccgcgcgctcagcgacttcaagagcggccgcgtcaccgtgctggtggccact
gatatcgccgcccgcggcatcgacatcgaccagttgccggtggtgatcaaccacgacctg
ccaatggtggccgaagactacgtgcaccgcatcggccgcaccggtcgcgccggctccgag
ggactggcgctgtcgctggtcagccacgacgaatcgggtctgctgcgcgacatccgcaag
ctgctcgaccaggacatcgcgatcaccgaggtgcccggtttcgaaccgtcgacgccgctg
cgcctcgacgccggtgcgccgcgtcccaagcagggccagcgccagccgcgtccgccgcga
cagaatggcaatggtgcgtcggcgcagcgtccgcatggccgtggcccgtcgaacggcaac
aacccgcacgccgccggcaaccgcaagcgccgccgcccgggcggccgccccgccgccaag
gcctga
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