Rhodanobacter glycinis: CS053_08510
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Entry
CS053_08510 CDS
T06136
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rgl
Rhodanobacter glycinis
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgl03016
]
CS053_08510
Enzymes [BR:
rgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CS053_08510
Transfer RNA biogenesis [BR:
rgl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CS053_08510
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF6069
Motif
Other DBs
NCBI-ProteinID:
QEE24539
UniProt:
A0A5B9DYA5
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All DBs
Position
complement(1982655..1983806)
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AA seq
383 aa
AA seq
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MHTCALQRFTEDSHAPAAPAAEWIDQRHALERWLAELPSAASPGLDTEFMRRNTFHPQLA
LLQLGWDGRYALVDPLAFDIGDALRPRLGATNTVVVMHSAGEDLETLAPFLPEGPGTLFD
TQIAAAFAGMSLGMSYRALVAELAGVELDKGETRSDWMQRPLTESQCSYATLDVVYLDTI
HAQLAERLQQRDRTAWHAEDCERLKQRASHRDGDPQPQRGSRGAAEWPRAQQALLRRILL
WRDRSARTLDRPRPWLLEDALAMSLAQQPPASLAELDQRSRGQRALRSPQRAELFELLAP
PVSDEELASTASIPAVPQGEAKKALGAMKQRIDQRATELDLPPGLLCPRKVLEEYVVTAE
WPDFLDGWRRSVLHDELPALLPG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacacctgtgcgctccagcgttttaccgaggattcccatgcccccgcagcccccgcc
gccgaatggatcgaccagcgccacgccctcgagcgctggctggccgaactgccgtccgcc
gcgtcgcccggactcgacaccgagttcatgcgccgcaacaccttccacccgcagttggcg
ttgctgcagctgggttgggatggccgttacgcactggtggacccgttggcgttcgacatt
ggtgacgccttgcgcccacgcctcggcgcgaccaacaccgtggtggtgatgcacagcgcc
ggcgaggatctggaaaccctcgccccgttcctgcccgaaggccccggcacgctgttcgac
acccagatcgccgccgccttcgccggcatgagcctgggcatgagctatcgcgcgctggta
gccgaactggccggcgtcgagctggacaagggcgaaacccgctcggactggatgcagcgt
ccgctcaccgaatcacagtgcagctacgccacgctcgacgtggtgtatctggacaccatc
cacgcccagctcgccgaacgcctgcaacagcgcgaccgtaccgcctggcacgccgaagat
tgcgaacgcctgaagcaacgcgccagccatcgcgacggcgacccgcagccgcagcgcggc
tcccgcggcgcggccgagtggccgcgggcgcagcaagcgctgttgcgccgcatcctgctg
tggcgtgaccgcagcgcccgcacgctcgaccgcccgcgtccctggctgctggaagatgcg
ctggcgatgagccttgcccagcaaccgcccgccagcctcgccgaactcgaccagcgcagc
cgtggccaacgcgccctgcgttcgccgcaacgcgccgaattgttcgaactgctggcgcca
ccggtgtccgacgaggagctggccagcaccgcatccattcctgccgtaccgcaaggcgaa
gcgaaaaaagcgcttggtgcgatgaagcagcggatcgaccagcgcgcgaccgaactggac
ctgccgcccggcctgctgtgcccgcgcaaggtgttggaggaatacgtggtcactgccgaa
tggcccgacttcctcgacggctggcgccgcagcgtattgcacgacgaactgcccgccctg
ttgcctggctga
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