Rhodanobacter glycinis: CS053_09385
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Entry
CS053_09385 CDS
T06136
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl00010
Glycolysis / Gluconeogenesis
rgl00020
Citrate cycle (TCA cycle)
rgl00260
Glycine, serine and threonine metabolism
rgl00280
Valine, leucine and isoleucine degradation
rgl00310
Lysine degradation
rgl00380
Tryptophan metabolism
rgl00620
Pyruvate metabolism
rgl00630
Glyoxylate and dicarboxylate metabolism
rgl00640
Propanoate metabolism
rgl00670
One carbon pool by folate
rgl00785
Lipoic acid metabolism
rgl01100
Metabolic pathways
rgl01110
Biosynthesis of secondary metabolites
rgl01120
Microbial metabolism in diverse environments
rgl01200
Carbon metabolism
rgl01210
2-Oxocarboxylic acid metabolism
rgl01240
Biosynthesis of cofactors
Module
rgl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rgl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rgl_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rgl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rgl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CS053_09385 (lpdA)
00020 Citrate cycle (TCA cycle)
CS053_09385 (lpdA)
00620 Pyruvate metabolism
CS053_09385 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
CS053_09385 (lpdA)
00640 Propanoate metabolism
CS053_09385 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CS053_09385 (lpdA)
00280 Valine, leucine and isoleucine degradation
CS053_09385 (lpdA)
00310 Lysine degradation
CS053_09385 (lpdA)
00380 Tryptophan metabolism
CS053_09385 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CS053_09385 (lpdA)
00670 One carbon pool by folate
CS053_09385 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rgl04147
]
CS053_09385 (lpdA)
Enzymes [BR:
rgl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CS053_09385 (lpdA)
Exosome [BR:
rgl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CS053_09385 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
HI0933_like
GIDA
FAD_binding_2
Pyr_redox_3
AlaDh_PNT_C
FAD_binding_3
FAD_oxidored
3HCDH_N
DAO
NAD_binding_8
Lycopene_cycl
2-Hacid_dh_C
Thi4
XdhC_C
DUF5506
Motif
Other DBs
NCBI-ProteinID:
QEE24690
UniProt:
A0A5B9E2E9
LinkDB
All DBs
Position
complement(2125888..2127312)
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AA seq
474 aa
AA seq
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MSDKFDVIVIGAGPAGYVAAIRAAQLGLKTACVDAFTGKDGKQALGGTCLNVGCIPSKAL
LDSSRQFWNIAHNFPVHGISVDNPKVDMATFIGRKDKIVKQFTGGIGQLFKANKVTPFFG
KGKLLKGNQVEITGNDGEKQTISATNVILASGSVPIELPFAKFDGKAIVDNAGALDFTEV
PKRLGVIGAGVIGLELGSVWKRLGAEVTIIEALPEFLAAADADVAKVAAKEFAKQGLDIK
LNAKLNKADVKKDGVHLVYTDKDGEQKLVVDKLLVAVGRRAYTDGLLADDTGVKLDERGR
IAVDEHNHTGVDGVWAIGDAVRGPMLAHKGSEEGVAVAEWIAGKAGHINLDTVPWVIYTE
PEIAWAGKTEKQLKEEGVPYKVGNFPFAAIGRAVAMNEAVGQVKMIAHADTDRILGVHMV
GPGVSELIAECVVAMEFKGSSEDLARIVHAHPTLSEAVHEAALSVDKRAIHKGN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaattcgacgtcatcgtcatcggtgccggccccgccggctatgtggctgcg
atccgcgccgcgcagctgggcctgaagaccgcctgcgtcgatgccttcaccggcaaggac
ggcaagcaggccctgggcggcacctgcctcaacgtgggctgcatcccttccaaggccttg
ctcgattcgtcgcgccagttctggaacatcgcgcacaacttcccggttcacggcatcagc
gtcgacaacccgaaagtggacatggccaccttcatcggccgcaaggacaagatcgtcaag
cagttcaccggcggcatcggtcagctgttcaaggccaacaaggtcacgccgttcttcggc
aagggcaagctgctgaaaggcaaccaggtcgagatcaccggcaacgacggcgagaagcag
accatcagcgccaccaacgtgatcctcgcttccggctcggtgccgatcgagttgccgttc
gccaagttcgacggcaaggccatcgtcgacaacgccggcgcgctggacttcaccgaggta
ccgaagcgcctgggcgtgatcggcgccggcgtgatcggtctggaactgggcagcgtgtgg
aagcgcctcggcgccgaggtcaccatcatcgaggccctgccggaattcctggccgccgcc
gatgccgatgtcgccaaggtcgccgccaaggaattcgccaagcagggcctggacatcaag
ctcaacgccaagctcaacaaggccgatgtgaagaaggacggcgtgcacctggtctacacc
gacaaggacggcgagcagaaactggtggtcgacaagctgctggtcgccgtgggccgccgc
gcctacaccgacggcctgctggccgacgataccggcgtgaagctggacgagcgcggccgc
atcgcggtcgatgagcacaaccacaccggcgtggacggcgtgtgggccatcggcgacgcc
gtgcgcggcccgatgctggcacacaagggttccgaggaaggcgtggcggtggccgaatgg
atcgccggcaaggccggtcacatcaacctcgacaccgtgccgtgggtgatctacaccgaa
cccgagatcgcctgggccggcaagaccgagaagcagctgaaggaagaaggcgtgccgtac
aaggtcggcaacttcccgtttgccgccatcggccgcgccgtggcgatgaacgaggccgtg
ggccaagtgaagatgattgcccacgccgacaccgatcgtatcctcggcgtgcacatggtc
ggcccgggcgtgtccgagctgatcgccgagtgtgtcgtggcgatggagttcaagggctcg
tccgaggacttggcgcgcatcgtccacgcgcatccgaccctgtcggaagccgtgcacgaa
gccgcgctgtcggtcgacaagcgcgccatccacaagggcaactga
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