KEGG   Rhodanobacter glycinis: CS053_09385
Entry
CS053_09385       CDS       T06136                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rgl  Rhodanobacter glycinis
Pathway
rgl00010  Glycolysis / Gluconeogenesis
rgl00020  Citrate cycle (TCA cycle)
rgl00260  Glycine, serine and threonine metabolism
rgl00280  Valine, leucine and isoleucine degradation
rgl00310  Lysine degradation
rgl00380  Tryptophan metabolism
rgl00620  Pyruvate metabolism
rgl00630  Glyoxylate and dicarboxylate metabolism
rgl00640  Propanoate metabolism
rgl00670  One carbon pool by folate
rgl00785  Lipoic acid metabolism
rgl01100  Metabolic pathways
rgl01110  Biosynthesis of secondary metabolites
rgl01120  Microbial metabolism in diverse environments
rgl01200  Carbon metabolism
rgl01210  2-Oxocarboxylic acid metabolism
rgl01240  Biosynthesis of cofactors
Module
rgl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rgl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rgl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rgl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rgl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rgl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CS053_09385 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CS053_09385 (lpdA)
   00620 Pyruvate metabolism
    CS053_09385 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CS053_09385 (lpdA)
   00640 Propanoate metabolism
    CS053_09385 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CS053_09385 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CS053_09385 (lpdA)
   00310 Lysine degradation
    CS053_09385 (lpdA)
   00380 Tryptophan metabolism
    CS053_09385 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CS053_09385 (lpdA)
   00670 One carbon pool by folate
    CS053_09385 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rgl04147]
    CS053_09385 (lpdA)
Enzymes [BR:rgl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CS053_09385 (lpdA)
Exosome [BR:rgl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CS053_09385 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like GIDA FAD_binding_2 Pyr_redox_3 AlaDh_PNT_C FAD_binding_3 FAD_oxidored 3HCDH_N DAO NAD_binding_8 Lycopene_cycl 2-Hacid_dh_C Thi4 XdhC_C DUF5506
Other DBs
NCBI-ProteinID: QEE24690
UniProt: A0A5B9E2E9
LinkDB
Position
complement(2125888..2127312)
AA seq 474 aa
MSDKFDVIVIGAGPAGYVAAIRAAQLGLKTACVDAFTGKDGKQALGGTCLNVGCIPSKAL
LDSSRQFWNIAHNFPVHGISVDNPKVDMATFIGRKDKIVKQFTGGIGQLFKANKVTPFFG
KGKLLKGNQVEITGNDGEKQTISATNVILASGSVPIELPFAKFDGKAIVDNAGALDFTEV
PKRLGVIGAGVIGLELGSVWKRLGAEVTIIEALPEFLAAADADVAKVAAKEFAKQGLDIK
LNAKLNKADVKKDGVHLVYTDKDGEQKLVVDKLLVAVGRRAYTDGLLADDTGVKLDERGR
IAVDEHNHTGVDGVWAIGDAVRGPMLAHKGSEEGVAVAEWIAGKAGHINLDTVPWVIYTE
PEIAWAGKTEKQLKEEGVPYKVGNFPFAAIGRAVAMNEAVGQVKMIAHADTDRILGVHMV
GPGVSELIAECVVAMEFKGSSEDLARIVHAHPTLSEAVHEAALSVDKRAIHKGN
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagcgacaaattcgacgtcatcgtcatcggtgccggccccgccggctatgtggctgcg
atccgcgccgcgcagctgggcctgaagaccgcctgcgtcgatgccttcaccggcaaggac
ggcaagcaggccctgggcggcacctgcctcaacgtgggctgcatcccttccaaggccttg
ctcgattcgtcgcgccagttctggaacatcgcgcacaacttcccggttcacggcatcagc
gtcgacaacccgaaagtggacatggccaccttcatcggccgcaaggacaagatcgtcaag
cagttcaccggcggcatcggtcagctgttcaaggccaacaaggtcacgccgttcttcggc
aagggcaagctgctgaaaggcaaccaggtcgagatcaccggcaacgacggcgagaagcag
accatcagcgccaccaacgtgatcctcgcttccggctcggtgccgatcgagttgccgttc
gccaagttcgacggcaaggccatcgtcgacaacgccggcgcgctggacttcaccgaggta
ccgaagcgcctgggcgtgatcggcgccggcgtgatcggtctggaactgggcagcgtgtgg
aagcgcctcggcgccgaggtcaccatcatcgaggccctgccggaattcctggccgccgcc
gatgccgatgtcgccaaggtcgccgccaaggaattcgccaagcagggcctggacatcaag
ctcaacgccaagctcaacaaggccgatgtgaagaaggacggcgtgcacctggtctacacc
gacaaggacggcgagcagaaactggtggtcgacaagctgctggtcgccgtgggccgccgc
gcctacaccgacggcctgctggccgacgataccggcgtgaagctggacgagcgcggccgc
atcgcggtcgatgagcacaaccacaccggcgtggacggcgtgtgggccatcggcgacgcc
gtgcgcggcccgatgctggcacacaagggttccgaggaaggcgtggcggtggccgaatgg
atcgccggcaaggccggtcacatcaacctcgacaccgtgccgtgggtgatctacaccgaa
cccgagatcgcctgggccggcaagaccgagaagcagctgaaggaagaaggcgtgccgtac
aaggtcggcaacttcccgtttgccgccatcggccgcgccgtggcgatgaacgaggccgtg
ggccaagtgaagatgattgcccacgccgacaccgatcgtatcctcggcgtgcacatggtc
ggcccgggcgtgtccgagctgatcgccgagtgtgtcgtggcgatggagttcaagggctcg
tccgaggacttggcgcgcatcgtccacgcgcatccgaccctgtcggaagccgtgcacgaa
gccgcgctgtcggtcgacaagcgcgccatccacaagggcaactga

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