Rhodanobacter glycinis: CS053_11315
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Entry
CS053_11315 CDS
T06136
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rgl
Rhodanobacter glycinis
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgl03016
]
CS053_11315 (truD)
Enzymes [BR:
rgl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CS053_11315 (truD)
Transfer RNA biogenesis [BR:
rgl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CS053_11315 (truD)
Prokaryotic type
CS053_11315 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QEE25018
UniProt:
A0A5B9DZJ8
LinkDB
All DBs
Position
complement(2579882..2580901)
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AA seq
339 aa
AA seq
DB search
MSDYELPRAHAETPPLTARLRSTPEDFRVEEILGYAADGSGEHALLWVEKREANTDWVAR
ELAKFAGVPPLNVGYAGLKDRHAVTRQAFTVQLAGKPDPDWSTFPHAEVKVLAATRHSRK
LKRGALRGNRFVLVLREVQGDRARAEEVLAEISARGVPNYFGEQRFGREGGNLAQARAMF
AGRRMDRAKRSILLSAARSHIFNAVLAARVERGAWDAPLDGEIWSLAGSRSWFGPEPFTD
ALAERLARGDIHPSGPLWGQGDPPSSGEVAELERELAAANTDLADGLVAARMDQERRALR
LLPQNLTWRWLADDALELAFELPAGAYATVVMRELAATL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattacgagctcccccgcgcccacgccgaaaccccacctctcactgcgcgcctg
cgcagcacccccgaggatttccgggtcgaggaaatcctcggctacgccgccgacggcagc
ggcgaacacgccttgctgtgggtggaaaagcgcgaagccaataccgactgggtggcgcgc
gaactggcgaagttcgccggcgtgccgccgctcaacgtcggttatgccggcctgaaggac
cgtcatgcggtgacgcggcaggccttcaccgtgcaattggcgggcaagccggacccggac
tggtcgacgttcccgcacgccgaagtgaaggtgctggcagccactcgccattcgcgcaag
ctcaagcgtggcgccttgcgcggcaaccgcttcgtgctggtgctgcgtgaagtgcagggc
gaccgtgcgcgtgccgaagaggtactggccgagatctccgcgcgcggcgtgccgaactat
ttcggcgagcagcgcttcgggcgcgagggcggcaacctggcccaggcgcgggcgatgttc
gcggggcgcaggatggaccgtgccaagcgctccatcctgttgtccgctgcgcgttcgcac
atattcaacgccgtgctggctgcacgggtcgagcgtggcgcgtgggatgcaccgctggat
ggcgaaatctggtcgctggccggctcacgttcgtggttcggcccggagccgtttaccgat
gcgctggccgagcgcctggcgcgcggcgacatccatccgtccggcccgctgtggggacag
ggcgacccgccgagcagtggcgaagtggctgaactggagcgcgagttggctgcggccaat
accgacctggccgatggcctggtcgccgcacgcatggaccaggagcgtcgggcgttgcgc
ctgctgccgcagaacctcacatggcgctggctggccgacgatgcgctggaactggcgttc
gagttgccggccggggcttatgcgacggtggtgatgcgggagttggcggcaactttatag
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