Rhodanobacter glycinis: CS053_12145
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Entry
CS053_12145 CDS
T06136
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CS053_12145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rgl03000
]
CS053_12145
03400 DNA repair and recombination proteins [BR:
rgl03400
]
CS053_12145
Enzymes [BR:
rgl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CS053_12145
Transcription factors [BR:
rgl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CS053_12145
DNA repair and recombination proteins [BR:
rgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CS053_12145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QEE25158
UniProt:
A0A5B9DZW5
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All DBs
Position
2769953..2771467
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AA seq
504 aa
AA seq
DB search
MSDAQIHSSLDPQTCEQARLSRDARFDGLFFVAVTSTGIYCRPVCPARASKRENVRYYAS
AAAAETAGFRPCLRCRPELAPGNLVWQRGDHVVARALKLIEAGVLDEGSLDDLARQVDVG
SRQLRRLFVDRLGAPPINVHTTRRLLFAKQLLTETSMPVTEVAMASGFRSLRRFNAAFAQ
ANRIAPRELRRHPRTPPGDTLVLRLGYRPPYDFDALLTFLRGRSLPGIEHVDEHSYARVF
GPADAPGWLRLSAWPNAEHALKLELHCPQPAQMLPVVTRIRRMFDLDADPQAIAGSLCTH
PVLRPLLRKRPGLRLPGGWDGFEIAVRAVLGQQVSVAAARTLASRIVQRHGIVVPNPPRP
GLERLFPSPETLADADLREIGVTTARSETIRGIARALLDGRVDFRNDQPLDAFVARWVAL
PGIGEWTAHYVAMRALSHPDAFPAADLILRRAAADDGSTLSTKALDHMAEAWRPWRAYAV
MHLWRSTADVPPAPRPKRHKEVRA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcccagatccattcctcgctcgatccacaaacctgcgaacaggctcgcctc
agccgcgatgcgcgtttcgacgggctgtttttcgtcgccgtcaccagcaccggcatctac
tgccggccggtgtgtccggcgcgggcttcgaagcgcgaaaacgtgcgctactacgccagc
gccgcggcggctgaaacagcagggtttcgtccgtgcctgcgttgccggccggaactggcg
ccgggcaaccttgtgtggcaacgcggcgatcatgtggtggcccgtgcgctgaagctgatc
gaggccggagtgctggatgagggctcgctggacgatctggcccggcaagtggatgtgggt
tcgcgccagttgcgccggttgttcgtggaccggctgggcgcaccgccgatcaacgtgcac
accacacgccgactgctgttcgccaagcagttgctgaccgagacatcgatgccggtgacc
gaagtggcgatggcctccggttttcgcagcctgcgccgcttcaatgccgcgtttgcgcag
gcgaaccgcattgcaccgcgcgaattgcgtcgccatccgcgcacgccgccgggcgatacg
ctggtgctgcgtttgggttatcgcccaccgtacgatttcgatgcgctgctgacgttcctg
cgcggccgctcgctgccgggtatcgagcacgtggacgaacacagttacgcgcgcgtgttc
gggcccgctgatgcaccgggctggctgcgcctcagcgcgtggccgaatgcggagcacgcg
ttgaagctggaactgcattgtccgcagccggcgcagatgttgccggtggtgacacgcatc
cgccgcatgttcgacctggacgccgatccgcaagccatcgccggcagcttgtgcacgcat
ccggtgctgcgtccgctgctgcgcaaacgccctggcctgcgcctgcccggcggctgggat
ggtttcgaaatcgcggtgcgcgcagtgctcggccagcaggtcagcgtggccgcggcgcgt
acgctggcctcgcgcatcgtgcagcgccacggcatcgtggtgccgaatccaccacgcccc
gggctggagcgattgtttccaagccccgaaaccctggccgatgccgacctgcgcgagatc
ggcgtgaccacggcacgatccgaaacgattcgcggcatcgctcgcgcgctgctggacggg
cgcgtggatttccgcaacgaccagccgctggacgccttcgtcgcacgctgggtggccttg
cctggcatcggcgaatggaccgcgcattacgtggccatgcgcgcactgagccatcccgat
gcgttccctgccgccgacctgatcctgcgtcgcgccgccgccgatgacggttcgacactc
agcacgaaagcgctcgaccacatggccgaagcatggcgcccgtggcgcgcctacgcggtg
atgcacctgtggcgcagtacggccgatgtaccacccgccccgcggcccaaacgccacaag
gaggtccgtgcatga
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