Rhodanobacter glycinis: CS053_12390
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Entry
CS053_12390 CDS
T06136
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rgl
Rhodanobacter glycinis
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rgl03009
]
CS053_12390 (rimO)
Enzymes [BR:
rgl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CS053_12390 (rimO)
Ribosome biogenesis [BR:
rgl03009
]
Prokaryotic type
ribosomal protein modification factors
CS053_12390 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
FAP42_B3
PrmA
Motif
Other DBs
NCBI-ProteinID:
QEE25202
UniProt:
A0A5B9DYI5
LinkDB
All DBs
Position
complement(2820191..2821528)
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AA seq
445 aa
AA seq
DB search
MSQASQKIGFVSLGCPKALVDSERILTQLKVEGYQIVPSYNEADAVVVNTCGFIDAAVQE
SLDSIGTALNENGKVIVTGCLGKRADLIREAYPDVLSISGPQDYASVMHAVHDVLPPKRN
KFLDIVPDTGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGNLVSRPVDEVLVEAEKLVK
GGVKELLVISQDTSAYGVDVKYAEHEWHGKAYRTRMTELCEGLSELGVWVRLHYVYPYPH
VDELMPLMAAGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERIRNWRKQVPNLTIRST
FIVGFPGETDAEFEELLDFLREAELDRVGAFAYSPVDGAKANELPGAVSEELKEDRLERF
MEVQAEISAAKLQRKIGSTMTVLVDEANADGAVARSAADAPEIDGSVLIADGHALKPGQF
VDVVIEAASEHDLHARLAHPALKIV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcttcgcagaagatcggtttcgtcagccttggctgccccaaggccctggtg
gattccgagcgcatcctcacccagctcaaggtcgagggctaccagatcgtgccgagctac
aacgaggccgacgcggtggtggtgaacacctgcggcttcatcgacgcagcggtgcaggag
tcgctggattcgatcggcaccgcactcaacgagaacggcaaggtgatcgtcaccggttgc
ctgggcaagcgcgcggacctgattcgcgaagcctatcccgacgtgctgtcgatcagtggg
ccgcaggattacgccagcgtgatgcacgcggtacacgacgtgctgccgcccaagcgcaac
aagttcctggacatcgtgccggacacgggcgtcaagctcaccccgaagcactatgcctac
ctgaagatttccgaaggctgcaaccaccgctgcagcttctgcatcattccgtcgatgcgc
ggcaacctggtctcgcgcccggtcgacgaggtgctggtcgaggccgaaaagctggtcaag
ggcggtgtgaaggaactgctggtgatctcgcaggacaccagcgcctacggtgtcgacgtg
aaatacgccgagcacgaatggcacggcaaggcgtaccgcacacgcatgaccgagctgtgc
gaaggcttgtcggaactgggcgtgtgggtgcgcctgcactacgtttacccgtacccgcac
gtggacgagctgatgccgctgatggccgccggcaagatcctgccgtacctggacatcccg
ttccagcatgccagcccgcgcatcctgaaactgatgaaacgccccggcaacatcgacaag
acgctggagcgcatccggaactggcgcaagcaggttccgaacctcaccatccgcagcacc
ttcatcgtcggcttccccggcgagaccgacgccgaattcgaggaactgctcgacttcctg
cgcgaagccgaactcgatcgcgtgggcgcgttcgcctactcgccggtggacggcgccaag
gccaacgaactgcccggcgcggtttccgaggagctgaaggaagatcgcctcgaacgcttc
atggaagtgcaggcggaaatctccgcggcgaaactgcagcgcaagatcggcagcacgatg
accgtactggttgatgaggcgaatgccgatggcgcggtcgcgcgttcggctgccgacgca
cccgagatcgacggcagcgtgctgatcgcggacggccacgcgctgaaacccggtcagttc
gtcgacgtcgtgatcgaagcggccagcgagcacgacctgcatgctcgcctagcgcatccc
gcgctgaaaatcgtgtaa
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