Rhodanobacter glycinis: CS053_13220
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Entry
CS053_13220 CDS
T06136
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl00300
Lysine biosynthesis
rgl01100
Metabolic pathways
rgl01120
Microbial metabolism in diverse environments
rgl01230
Biosynthesis of amino acids
Module
rgl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CS053_13220 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rgl01002
]
CS053_13220 (dapE)
Enzymes [BR:
rgl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CS053_13220 (dapE)
Peptidases and inhibitors [BR:
rgl01002
]
Metallo peptidases
Family M20
CS053_13220 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QEE25348
UniProt:
A0A5B9E0C1
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Position
complement(2994404..2995537)
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AA seq
377 aa
AA seq
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MSDVLELARDLIRRRSVTPDDAGCQELLAERLEHAGFRIERMRHGEVDNLWAVHGEGGPT
LVFLGHTDVVPSGPEQAWRHPPFAAEIADGRLYGRGAADMKGSVAAMTVALEQFAGTHPH
HSGRVALLLTSDEEGPTNLDGVRRVAAHFRERGERVDWCVVGEPSAKERLGDLIRVGRRG
SLSGTLTVRGVQGHVAYPEKALNPIHAFAPALTELAAERWDEGNADFPPTSFQVSNLNAG
TGATNVIPGELKALINFRFCTASSADELRQRTEAILHRHGLDFTLEWNLSGESFLTPPGG
RLRETVVAVCRELCGIEPEQSTGGGTSDGRFIAPLGAEVVELGPVNATIHKVDECVAVAD
LDRLPELYRAVCERLLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgttctcgaacttgcccgtgacctgatccgtcgccgctccgtcacccccgac
gatgccggttgccaggaactgctggccgagcggctggaacacgcgggcttccgcatcgag
cggatgcgtcatggcgaggtggacaacctgtgggccgtgcatggcgagggtgggccgacc
ctggttttccttggtcataccgacgtggtgccgagtggcccggagcaggcatggcgccat
ccgccgttcgccgccgagatcgcggatgggcgtctgtacggccgtggcgccgccgacatg
aaaggctcggtggcggcgatgacggtggcactggagcagttcgccggcacgcatccccat
cattccggtcgcgtggccctgctgctgaccagcgacgaggaaggcccgaccaacctcgat
ggcgtgcgtcgcgtggccgcgcactttcgcgagcgtggcgagcgcgtcgactggtgcgtg
gtgggcgagccatcggcgaaggaaaggctcggcgacctgattcgcgtagggcggcgtggc
tcgctttcaggcacgctgacggtgcgtggcgtgcaggggcacgtcgcctatccggagaag
gcgctgaatccgattcatgcctttgcgcccgcactcaccgaactggctgccgagcgctgg
gacgaaggcaacgccgattttccgccgacatcgttccaggtctccaatctcaatgcgggc
accggcgccaccaacgtgattccgggtgagttgaaggcgctgatcaatttccgtttctgc
accgccagcagtgccgacgagctgcgccagcgcaccgaagcgatcctgcatcgacatggc
ctggacttcacgctggagtggaatctctccggcgaatccttcctcacgccaccaggcggt
cgcttgcgtgaaacggtggtggcggtgtgccgcgagctgtgcggcatcgagcccgaacag
agtaccggtggtggcacgtccgacgggcgcttcatcgcgccgttgggcgccgaggtggtc
gagctggggccggtcaacgccaccatccacaaggtggacgaatgcgtggccgtggccgac
ctggatcgtttgccggaactttatcgcgccgtgtgcgaacgcctgctggcctga
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