Rhodanobacter glycinis: CS053_13340
Help
Entry
CS053_13340 CDS
T06136
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl03030
DNA replication
rgl03430
Mismatch repair
rgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CS053_13340 (dnaE)
03430 Mismatch repair
CS053_13340 (dnaE)
03440 Homologous recombination
CS053_13340 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgl03032
]
CS053_13340 (dnaE)
03400 DNA repair and recombination proteins [BR:
rgl03400
]
CS053_13340 (dnaE)
Enzymes [BR:
rgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CS053_13340 (dnaE)
DNA replication proteins [BR:
rgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CS053_13340 (dnaE)
DNA repair and recombination proteins [BR:
rgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CS053_13340 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
QEE25371
UniProt:
A0A5B9E468
LinkDB
All DBs
Position
3019029..3022604
Genome browser
AA seq
1191 aa
AA seq
DB search
MSARFVHTHLHSEFSLVDSTIRIKALVGACVRAGMPAVALTDDSNMFALVKFYKACNAAG
IKPLCGSDLWISAPDDPRPWRLTVLCQHREGYLNLSRLVSRAWRDGQQGGRALVDAGWLT
PQASDGLIALLGRESEVARIAVNQGTEAALAKLRPLARLFPDRLYLELTRCGREGEESWN
TAALALATELDLPVIASNDARFLTRDDFEAHEARVCINQGRVLADPKRPRSYSNQQYLKS
PEEMVELFADLPEALENTLELARRCNLELSFGTYYLPDFPVPEGHDLDSHIRELAREGLA
ERLASAPLAADHTLDDYHARLERELDVIIKMGFPGYFLIVADFINWSKQHGIPVGPGRGS
GAGSLVAWVLKITDLDPLQFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGR
DHVSQIITYGSMAAKAVLRDSGRVLGMGYGQVDKLAKLIPARPLDLTLTDALGRSEKSKK
ETDRVVKEFCEVYEQDEDARTLIDLALKLENLTRNVGKHAGGVVIGPKPLTEFAPLYCEP
GGGGVVTQYDKNDVEDVGLVKFDFLGLRTLTIIDWAVKAINARRAQTGEEMLDIAALPLD
DSASYDLLKKAQTVAVFQLESSGMQRMLKDAKPDRFGDIIALVALYRPGPMDLIPSFIAR
KHGKEEVEYPDPRVEPILKETYGIMVYQEQVMQMAQIVGGYTLGGADLLRRAMGKKKVEE
MVKHRAIFREGAAKDGLSGDKADSIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHYP
AEFMAATISSDMDNTDKAVTFIDEASAIGIEVLPPDVNTSDYMFVAMDPAGVTPVAGKGA
QTIRYGLGAIKGVGQGACESIVQERQRTGAYKDLADFCRRVDSTKLNRRVLEALVLSGAL
DALAPNRASLMLQLPNAIKAAEQYSRDQQAGQNDMFGAAMGAAQSVVQIDLPTAPDWPLE
QKLQGERDTLGHYLSGHPTDPWREELAQLSTCPLGEIGERYQPPRPRKNDNDDGNRFRRG
PDTPWTVAGMVSAVRKRGDSDAFVRLEDGSGIIEVSFFGELYQQAAPLLVRDEILVVEGG
LRIDEFSGGGFQLRARNVVTLGDACRRRARLLHLKLNGIGPDFVQQLRQTLAGYRGGHAS
VVLGDYHNQNAQATLELGEDWRVDAIPDLLRAVRNLPGVEAARLRLVRNQE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacgcttcgtccacacgcatctgcacagcgaattttcgctggtcgattcgacc
atccgcatcaaggcgctggtcggcgcctgcgtgcgcgccggcatgccggcggtggcgctc
accgacgacagcaacatgttcgcgctggtgaagttctacaaggcctgcaacgccgccggc
atcaagccgttgtgcgggagcgacctgtggatttccgcaccggatgacccgcgcccgtgg
cggctcaccgtgttgtgccagcaccgcgagggttatctcaatctttcgcggctggtctcg
cgcgcctggcgtgacggccagcaaggtggccgggcgctggtcgatgccggctggctgacg
ccgcaagccagcgacggcctgatcgccctgcttggccgcgagagcgaagtggcccgcatc
gcggtgaaccagggcaccgaagcggcactggcgaagctgcgtccgctggcgaggctgttc
cccgaccggctgtatctggaactgacccgctgcggccgcgagggcgaggaaagctggaac
acggctgcgctggcgttggccaccgagctcgacctgccggtgattgccagcaatgacgcg
cgcttcctcacccgcgatgacttcgaggcgcacgaggcacgcgtatgcatcaaccagggt
cgcgtgctggccgatcccaagcgcccgcgcagctacagcaaccagcaatacctgaaatca
cccgaggagatggtcgagctgttcgccgatcttcccgaggcgctggaaaacaccctggag
ctggcccggcgctgcaacctcgagctgagcttcggcacctactacctgcccgacttcccg
gtgccggaaggccacgatctggacagccacatccgtgaactggcgcgcgaaggcctggcc
gaacgcctggccagcgcgccgctggccgccgaccacaccctggacgactaccacgcgcga
cttgagcgcgagctggacgtcatcatcaagatgggctttcccggctacttcctgatcgtg
gccgacttcatcaactggagcaaacagcacggcatcccggtagggccgggtcgtggctcg
ggcgccggctcgctggtggcctgggtgctgaagatcaccgacctcgatccgttgcagttc
gacctgctgttcgagcgcttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatc
gacttctgcatggaccgccgcgacgaggtgatcgactacgtggcgcgcaagtacggccgc
gaccacgtcagccagatcatcacctacggctcgatggcagccaaggccgtgctgcgcgat
tccggccgcgtgctgggcatgggttacggccaggtcgacaagctggccaagctgattcct
gcgcggccgctggacctcacgctgaccgacgcgctgggccgctcggagaaatcgaagaag
gaaaccgatcgcgtcgtcaaggaattctgcgaggtctacgagcaggacgaagacgccaga
accctgatcgacctggcgctgaagctggaaaacctgacccgcaacgtgggcaagcacgcc
ggcggcgtggtgatcgggcccaagccgctcaccgagttcgccccgctgtactgcgaaccc
ggcggcggtggcgtggtcacccagtacgacaagaacgatgtcgaggacgtgggcctggtg
aagttcgacttcctcggcctgcgcacgctgaccatcatcgactgggcggtgaaggcgatc
aacgcgcgccgcgcgcaaaccggcgaagagatgctggacatcgccgcgctgccgctggat
gacagcgccagctacgacctgctgaaaaaggcgcagaccgtcgccgtattccagctcgaa
tcctccggcatgcagcgcatgctgaaggacgcgaagcccgaccgctttggcgacatcatc
gcgctggtggcactgtaccgccccggtccgatggacctgattcccagcttcatcgcgcgc
aagcacggcaaggaagaagtcgagtatcccgaccctcgcgtcgagccgatcctgaaagag
acctacggcatcatggtctaccaggagcaggtgatgcagatggcgcagatcgtcggcggc
tacacgctcggcggcgccgacctgttgcgccgtgcgatgggcaagaagaaagtcgaggag
atggtgaagcaccgcgccatcttccgcgaaggcgcggcgaaagacgggctctccggcgac
aaggccgattccatcttcgacctgatggagaagttcgccggctacggcttcaacaaatcg
catgcggccgcctatgcgctggtttcctaccagaccgcgtggctgaaggcgcactacccg
gccgagttcatggccgcgacgatctcgtcggacatggacaacaccgacaaggccgtgacc
ttcatcgacgaagccagcgccatcggcatcgaggtgctgccgccggacgtgaacacctcc
gactacatgttcgtggcgatggaccccgccggcgtcaccccggtggccggcaagggagca
caaaccatccgctacggccttggcgcgatcaagggcgtgggccagggcgcgtgcgagtcc
atcgtccaggagcgccagcgcaccggcgcctacaaggacctggccgacttctgccgccgc
gtggattcgaccaagctcaaccgtcgcgtgctcgaagcgctggtactgtccggcgcgctc
gatgcgctggcgcccaatcgcgccagcctgatgctgcagttgcccaacgcgatcaaggcc
gccgagcaatactcgcgggaccagcaggccggccagaacgacatgttcggtgcggccatg
ggcgccgcccagtcggtggtgcagatcgacctgccgaccgcaccggactggccgctggaa
cagaagctgcagggcgaacgcgacacgctgggccactacctgtccggccatcccaccgac
ccgtggcgcgaggagctggcgcagctgtccacctgcccgctgggcgagatcggcgagcgc
taccagccgccgcgcccacgcaagaacgacaacgacgacggcaaccgtttccggcgtggc
ccggatacgccgtggacggtcgccggcatggtttcggccgtgcgcaagcgcggcgatagc
gatgccttcgtgcggctggaagacggcagcggcatcatcgaggtgagcttcttcggcgag
ctgtaccagcaagccgcgccgctgctcgtgcgcgatgagatcctggtggtcgaaggcggc
ctgcgcatcgacgaattttccggtggcggcttccagctgcgcgcgcgcaacgtcgtcacg
ctcggcgatgcctgccgccgccgggcgcgcctgctgcacctcaagctcaacggcatcggc
ccggacttcgtacagcagttgcggcaaaccctggccggttaccgcggcggccacgccagc
gtcgtcctcggcgactaccacaaccagaacgcccaggccacgctggaattgggcgaggac
tggcgcgtggatgccattcccgacttgctgcgcgccgtgcgcaacctgcccggcgtagag
gcggcacggctgcggctggtcagaaatcaggagtga
DBGET
integrated database retrieval system
