Rhodanobacter glycinis: CS053_14075
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Entry
CS053_14075 CDS
T06136
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CS053_14075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgl03019
]
CS053_14075 (recQ)
03400 DNA repair and recombination proteins [BR:
rgl03400
]
CS053_14075 (recQ)
Enzymes [BR:
rgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CS053_14075 (recQ)
Messenger RNA biogenesis [BR:
rgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CS053_14075 (recQ)
DNA repair and recombination proteins [BR:
rgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CS053_14075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QEE25501
UniProt:
A0A5B9E4U0
LinkDB
All DBs
Position
complement(3161212..3163026)
Genome browser
AA seq
604 aa
AA seq
DB search
MQSSPLDILESVFGYSSFRGEQQAIVEHLAEGHDALVLMPTGGGKSLCYQIPALLRQGTG
IVVSPLIALMQDQVDALRAAGVAAAYLNSSLDAESQREVERQLLAGELNLLYVAPERLLT
SRFLGLLERMEPALFAIDEAHCVSQWGHDFRPEYRELTLLHERFPHVPRIALTATADPRT
REEIVERLALQDARQFISSFDRPNIGYRVMLKHNPRTQLMRFIEGHRGEAGIVYCLSRKK
VDDTAAWLAEAGIEALPYHAGLDAATRARHQQRFLREDGVVMVATVAFGMGIDKPDVRFV
AHLDLPRSMEGYYQETGRAGRDGLPAEAWMVYGLSDVVTMSQMIAQSESGDERKRVERQK
LESLLAYAEATRCRRELLLGAFGEVFHGPCGHCDNCVEPPKTWDATVPAQKALSAVYRSG
QRFGAGHVVDILRGVDSERVGQLGHDKLSTFGIGADMDEKGWRSVFRQLLAAGLLATDAE
GYGTLRLTKASREVLVDGRRVLLREDAKPVRSTRRRRDSQLVTGASIGIEAYEQPLWDAL
RALRTQLAKQQGVPPYVVFHDATLLAMLRAMPANEDELAEVSGVGEAKLKRYGRDFLAVI
NAKE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctcccccctcgacatcctcgaaagcgttttcggctattccagtttccgcggc
gagcaacaggccatcgtcgaacacctggccgaaggccacgatgcgctggtgctcatgccc
accggtggcggcaagtcgctgtgctaccagattcccgcgctgctgcggcagggcaccggc
atcgtggtctcgccgctgatcgcgttgatgcaggatcaggtggatgccttgcgcgccgcc
ggcgtggccgcggcctacctcaactccagcctggatgccgagagccagcgtgaggtggaa
cggcagttgctggccggcgaattgaacctgctctacgtggcgccggagcgcctgctcacg
tcgcgcttcctggggttgctggaacgcatggagcccgcgctgttcgctatcgacgaagcg
cattgcgtatcgcaatggggccacgatttccgccccgaataccgtgagctgaccctgttg
cacgagcgcttcccgcacgtgccgcgcatcgcgcttactgccaccgccgacccgcgcacg
cgcgaggagatcgtcgagcggctggcgttgcaggatgcgcgccagttcatttccagcttc
gaccgtccgaacatcggctaccgggtgatgctgaagcacaacccgcggacgcagctgatg
cgtttcatcgaggggcatcgcggcgaggccggcatcgtctattgcttgagccgcaagaag
gtggacgacaccgccgcatggctggccgaggccgggatcgaggcgctgccgtaccacgcc
gggctcgacgcggccacgcgcgcgcggcatcagcagcgcttcctgcgcgaggatggcgtg
gtgatggtggccacggtcgcgttcggcatgggtatcgacaagccggatgtgcgcttcgtg
gcccacctggacctgccgcgttcgatggaaggctattaccaggaaaccggtcgcgccggt
cgcgatggcctgccggccgaggcgtggatggtctacggtctgtccgacgtggtgacgatg
agccagatgattgcgcagtccgaatcgggcgacgagcgcaagcgcgtcgaacggcagaaa
ctggaatcactcctggcctatgccgaagccacgcgttgccggcgggagctgctgctcggt
gccttcggcgaggtattccatggcccctgcggccattgcgacaactgcgtcgagccaccg
aaaacctgggacgccaccgtgcccgcgcagaaggcgttgtcggcggtatatcgcagcggt
cagcgtttcggcgccggccatgtcgtcgacatcctgcgtggcgtggacagcgagcgcgtg
ggccagctcggtcacgacaagctcagcaccttcggcatcggcgccgacatggacgagaag
ggctggcgctcggtgttccgccagttgctggccgccggcctgctggccaccgacgcggaa
ggctacggcacgctgcggctgaccaaggccagtcgcgaagtgctggtcgatggacgacgg
gtgttgctgcgcgaggatgccaagccggtgcgctccacgcgccgtcgccgcgacagccag
ctcgtcaccggggccagcatcggcatcgaggcgtacgagcagccgctgtgggacgccttg
cgcgccctgcgcacgcaactggcgaagcagcagggcgtgccgccgtacgtggtgttccac
gatgccacgctgctggccatgctgcgcgcgatgccggccaacgaggacgagctggccgag
gtcagcggcgtcggcgaagccaagctcaagcgctatggtcgcgatttcctggcggtgatc
aacgcgaaggaatga
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