Rhodanobacter glycinis: CS053_14505
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Entry
CS053_14505 CDS
T06136
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl00260
Glycine, serine and threonine metabolism
rgl00460
Cyanoamino acid metabolism
rgl00630
Glyoxylate and dicarboxylate metabolism
rgl00670
One carbon pool by folate
rgl00680
Methane metabolism
rgl01100
Metabolic pathways
rgl01110
Biosynthesis of secondary metabolites
rgl01120
Microbial metabolism in diverse environments
rgl01200
Carbon metabolism
rgl01230
Biosynthesis of amino acids
rgl01240
Biosynthesis of cofactors
rgl04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CS053_14505
09102 Energy metabolism
00680 Methane metabolism
CS053_14505
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CS053_14505
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CS053_14505
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CS053_14505
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CS053_14505
Enzymes [BR:
rgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CS053_14505
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DUF817
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
QEE25581
UniProt:
A0A5B9E530
LinkDB
All DBs
Position
complement(3255133..3257343)
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AA seq
736 aa
AA seq
DB search
MILPAQRTGAGHMNRSVERGGVRLAAFDRWLGGRSMARGRLAVFAHEFVCFGLKQASACL
FGGLMVALLLVSWRWYPRDAWLARYDFLTLAAVAIQCGLLLARLESREEAKVILLFHVVG
TAMELFKTAMGSWNYPEPSLLRLGGVPLFTGFMYAAVGSYLARAWRLFDFRFSRHPPFGA
TVALAVAIYLNFFTHHYLPDARPVLFVAVAVLFGRCQVHYRVRRIHRRMPLLLGFVLVAL
FIWGAENIGTYSHAWLYPAQRHGWHMVPPGKLGSWLLLMIISYVMVSALHRPNRVPVAAT
RRRRYTFGINLHHPSAEARMFTKDCTIAGYDDELAKAIADEGRRQEDHVELIASENYASP
RVMEAQGSKLTNKYAEGYPSKRYYGGCEYVDVAEKLAIERVKQLFDCDYANVQPHSGSQA
NQAVYFALLQPGDKILGMSLAHGGHLTHGAKVNISGKLLDAVQYGVDDNGIVDMDEVERL
AVEHKPKMIVAGFSAYSQVMDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLPHAH
VVTSTTHKTLRGPRGGIILAKGAGEEIEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALE
PAFKAYQTQVVKNARAMAKTIIARGYKIVSGGTENHLMLIDMIGKGVTGKAAEAALGKAH
ITVNKNAVPNDPQKPFVTSGLRVGTPAVTTRGYQEADCVELAGWICDVLDAPEDEAVIAA
VRAKVEAQCKKFPVYG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattttgcctgctcagcggactggggcagggcacatgaacaggagcgtggagcggggc
ggggtgcggctggcggcattcgatcgctggctgggcgggcgatcgatggcgcgtggccga
ctcgccgtcttcgcccatgaattcgtctgttttggcctgaaacaggcctctgcctgcctg
tttggcgggctgatggtggccctgctgctggtgagctggcgctggtatccacgcgatgcc
tggctggcgcgctacgacttcctcaccctggccgccgtggcgatccagtgcggcttgctg
ctggcccgactggaaagtcgcgaggaggcgaaggtgatcctgctgttccacgtggtcggc
acggcgatggaactgttcaagaccgcgatgggctcatggaactacccggaaccctcgctg
ctgcgactgggcggcgtgccgctgtttaccggcttcatgtacgcggccgtgggcagctac
ctcgcccgtgcctggcggttgttcgatttccgcttcagccggcacccgccatttggggcg
acggtggcgctggccgtggccatctacctcaatttctttacccatcactaccttccggat
gcccggccggtgctgtttgtggcggtggcagtgctgttcggtcgttgccaggtgcactac
cgggttcggcggatacaccggcgcatgccgctgctgttgggcttcgtgctggtggcgctg
ttcatctggggggccgaaaacatcggtacatacagtcacgcatggttgtatccggcgcag
cggcacggttggcacatggtcccgcccggcaagctgggttcgtggctgctgctgatgatc
atcagttacgtgatggtgtcggcgttgcaccggccgaatcgggtgccggtggccgcaacc
cggcggcggcgctacactttcgggattaacctccaccacccatccgcagaggctcgaatg
ttcaccaaggactgcacgatcgccggttatgacgacgaactggccaaggccatcgccgac
gaaggacgccgccaggaagaccacgtcgagttgatcgcctcggagaattacgccagcccg
cgggtgatggaagcacagggctccaagctcaccaacaaatatgcggaaggctatccgtcc
aaacgctactacggtggctgcgagtacgtggacgtggccgagaagctggcgatcgagcgc
gtgaagcagctgttcgattgcgattacgccaatgtgcagccgcattccggctcgcaggcc
aaccaggcggtgtacttcgcgctgctgcagccgggtgacaagatcctgggcatgagcctg
gcgcatggtggccatctcacccacggtgccaaggtcaacatttccggcaagcttctcgac
gccgtgcagtatggcgtggatgacaacggcatcgtcgacatggacgaggtcgagcgcctg
gccgtggagcacaagccgaagatgatcgtggccggtttcagcgcctattcgcaggtgatg
gactgggcgcgtttccgcgccatcgccgacaaggtcggtgcctacctgttcgtggacatg
gcgcacgtcgccggtctggtcgccgcaggcgtgtatccgagcccgctgccgcacgcgcac
gtggtcacctccaccacgcacaagaccctgcgcggtccgcgtggcggcatcatcctggcc
aagggtgcgggcgaggagatcgaaaagaagctgcagtcgatcgtgttccccggcattcag
ggcggcccgctgatgcacgtgatcgcggccaaggcggtggcgttcaaggaagcactggag
ccggcgttcaaggcctaccagacgcaggtggtgaagaacgcgcgggcgatggccaagacc
atcatcgcgcgcggctacaagatcgtttccggcggtaccgaaaaccacctgatgctgatc
gacatgatcggcaagggcgtcaccggcaaggctgcggaagccgcgttgggcaaggcgcac
attacggtcaacaagaacgccgtgccgaacgacccgcagaaaccctttgtcacctccggc
ctgcgcgtgggcacgcccgccgtcaccacccgcggctaccaggaggccgattgcgtggag
ctggccggctggatctgcgacgtgcttgatgcgcccgaagacgaggcggtgatcgccgcc
gtgcgcgccaaggtcgaggcgcagtgcaagaagttcccggtgtacggctga
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