Mediterraneibacter gnavus: RGna_00980
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Entry
RGna_00980 CDS
T06719
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00260
Glycine, serine and threonine metabolism
rgn00460
Cyanoamino acid metabolism
rgn00630
Glyoxylate and dicarboxylate metabolism
rgn00670
One carbon pool by folate
rgn00680
Methane metabolism
rgn01100
Metabolic pathways
rgn01110
Biosynthesis of secondary metabolites
rgn01120
Microbial metabolism in diverse environments
rgn01200
Carbon metabolism
rgn01230
Biosynthesis of amino acids
rgn01240
Biosynthesis of cofactors
rgn04981
Folate transport and metabolism
Module
rgn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGna_00980
09102 Energy metabolism
00680 Methane metabolism
RGna_00980
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RGna_00980
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RGna_00980
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RGna_00980
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RGna_00980
Enzymes [BR:
rgn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RGna_00980
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QHB25161
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All DBs
Position
186758..187993
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AA seq
411 aa
AA seq
DB search
MYDFEEIRKEDPEIAEAIQAEMARQNSHIELIASENWVSKAVMAAMGSPLTNKYAEGYPG
KRYYGGCQCVDVAENLAIERAKKLFGCEYVNVQPHSGAQANMAVQFAMLTPGDKVMGMNL
DHGGHLTHGSPVNMSGKYFEITPYGVNEEGVIDYEEVRRIAKECRPKLIIAGASAYARII
DFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPIPYAHVTTTTTHKTLRGPRGGMILS
SNEMNEKFNFNKAIFPGIQGGPLMHVIAAKAVCFKEALSPDFVAYQEQILKNAKALCNGL
LERGVKIVSGGTDNHLMLVDLTGTNVSGKELEKRLDQAHITCNKNTIPNDPRSPFVTSGV
RLGTPAVTSRGMKEQEMDQIAEMIAMVIRDEKNVEQVKEMVQKLTEKYPLC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattttgaagaaataagaaaagaagatccggaaattgcagaagcgattcaggca
gagatggcaagacagaattcccatattgagctgatcgcctcagaaaactgggtgagcaaa
gcagtgatggcagcgatgggaagtccgctcacgaacaaatatgcggaagggtatccggga
aaacgttattatggcggatgccagtgtgtagatgtggcagagaatctggcgattgagcgt
gcgaaaaagctgtttggctgtgaatatgtcaatgtacagccgcactccggggcacaggcg
aatatggcagtgcagtttgcgatgctcactccgggagataaagtgatgggaatgaacctg
gatcatggtggtcacctgacgcatggatctccggtcaatatgtccggaaaatattttgag
atcacaccgtatggtgtcaatgaagaaggcgtgatcgattatgaggaagttcgaaggatt
gcgaaagagtgccggccgaagctgatcattgcgggagcaagtgcctatgccagaatcata
gattttaagaaattccgtgagattgcagatgaggtgggagcttatctgatggtagatatg
gctcatattgcaggtctggtcgcagcaggacttcatccgagcccgatcccgtatgcacat
gtgacgacaaccaccacgcataagacactgcgcggaccacgaggcggcatgatcttaagc
agcaatgagatgaatgaaaagttcaattttaacaaagcaatctttcctggaattcaggga
ggtccgctgatgcatgtgattgcagcaaaagcagtgtgcttcaaagaagccctaagtccg
gatttcgttgcatatcaagagcagatcctgaaaaatgcgaaagcattgtgcaatggatta
ttagagcgaggtgtgaagattgtatccggtggaacggacaaccatttgatgctggtggat
ctgactggaaccaatgtcagcggaaaagaactggaaaagcgtctggatcaggctcatatc
acctgcaataaaaatacaatcccgaatgatccgcgctctccgtttgtgacaagtggtgtg
cgtctggggactccggcagttacaagcagaggaatgaaagagcaggagatggaccagatt
gcggagatgattgcaatggtgatccgggatgagaaaaatgtagaacaggtaaaagaaatg
gtgcagaagctgacagaaaaatatcctctgtgctaa
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