Mediterraneibacter gnavus: RGna_01035
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Entry
RGna_01035 CDS
T06719
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RGna_01035
09124 Replication and repair
03420 Nucleotide excision repair
RGna_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rgn03021
]
RGna_01035
03036 Chromosome and associated proteins [BR:
rgn03036
]
RGna_01035
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_01035
Enzymes [BR:
rgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RGna_01035
Transcription machinery [BR:
rgn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RGna_01035
Chromosome and associated proteins [BR:
rgn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RGna_01035
DNA repair and recombination proteins [BR:
rgn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RGna_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Rad4
PhoH
Motif
Other DBs
NCBI-ProteinID:
QHB22187
LinkDB
All DBs
Position
196359..198710
Genome browser
AA seq
783 aa
AA seq
DB search
MKEETIIRISVRSLVEFILREGDIDNRVSGSMEKDAMLLGGKIHRKIQSRMGTNYTAEVP
LKIQMPCDGFVLQIEGRADGVLKDDGKVLIDEIKGILRSLEHLEAPVPVHLAQAKCYAYI
YAVQNSLKCIDVQMTYCQMETEEIRRFCQEFEFQELQTWFQDLVTQYEKWAKFEIEWRNV
RNDSIRQIEFPFPYREGQRDLVASVYRTILRKKKLFIQAPTGVGKTMATVFPAVRAMGEG
LGEKIFYLTAKTIMRTVAEQAFSLLKEKGLLYKTITLTAKEKICFCEEAECNPDACPYAK
GHFDRVNDAVFDLITHSGDWSREVLEEQAKKYMVCPFEMSLDVSNWADAVICDYNYVFDP
QAHIKRFFSESGKEEYLFLIDEAHNLVERGREMYSASLYKEDLLEVRKLVKAEDPKLAKR
LSECNQQFLELKRECEHYQILKSVSHIALKLMNVLSKLEDYLEECKDAEKKKRVLDFYFA
VRSFLNIHDIMDENYVIFSEMMEDGRFQIKLFCVNPAVNLQNYLEQGSSTIFFSATLLPV
HYYKKLLSVEKDDYAVYAHSSFPQENKFLFIGTDVSTRYTRRGESTYQRFARYIAVMAEQ
KKGNYMAFFPSYRFLEEVHTCFLECVDHEVDSICQVSYMDEEQREEFLEEFEREREKSLV
AFCVMGGIFSEGIDLTEDKLIGAVIAGTGLPQVCTEREILKQYFNAADMDGFDYAYLYPG
MNKVLQSAGRVIRTESDRGVILLLDDRFREMRYREVFPREWQQYQLGSVKNLEQEIRTFW
ESP
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggaaacaatcataaggatatctgtccgcagccttgtagaatttattctgcgg
gaaggggacattgacaacagagtgtccggcagtatggaaaaagatgccatgctgctgggc
ggtaaaatacaccgcaaaatacaaagccgtatgggaacgaattacacagcggaggttccg
cttaaaatacagatgccgtgcgatgggtttgttttgcagatagaagggcgcgccgatgga
gttttgaaagatgacggaaaagtcctgatcgatgagatcaaggggattttgcgaagtctg
gaacatctggaagcgcccgttcccgttcatttggctcaggcaaaatgttatgcttatatt
tatgcagttcagaattctttgaagtgcattgacgttcagatgacgtattgtcagatggaa
acagaggaaatccgcaggttttgccaggaatttgaatttcaagagcttcagacgtggttt
caggatctggtgacacaatatgaaaaatgggcaaaatttgaaattgaatggcggaatgta
cgcaatgattcgatccggcagattgagtttccttttccctatcgagaaggacagcgcgac
ctggtggcctcggtataccgcacgatcttgcgaaagaaaaagctgtttatccaggcgcct
accggagtgggaaaaacaatggcaactgtatttccggcagtgagggcaatgggggaaggg
ctgggagaaaagattttttatctgacagcgaagacgattatgaggacagttgcagagcag
gcattttccctgttgaaagaaaaggggctgttgtataagaccattacgctgacagcaaaa
gaaaaaatctgtttttgtgaggaggcagagtgcaatccggatgcctgtccttatgcaaaa
ggacattttgacagagtgaatgatgcagtttttgatctgatcacacattccggcgactgg
agcagagaggttctggaagaacaggcgaaaaagtacatggtctgtccgtttgagatgtct
ctggatgtgtccaactgggcagatgcagtgatctgtgattacaattatgtgtttgatccg
caggctcatataaagcgctttttctcagaaagtggaaaagaggaatacctgtttctgatc
gatgaggcgcataatctggtggagcggggaagggagatgtatagtgcatctctatacaaa
gaagatttactggaagtaagaaaactggtaaaggcagaggatccgaaactggcaaagcgt
ttgtcagaatgtaatcagcagtttttggaattaaagagagagtgtgaacattatcagatt
ttaaaaagtgtatcgcatattgcgttaaagctgatgaatgtgctttcgaaactggaagat
tatctggaagagtgcaaggatgcagaaaagaaaaagcgggtgctggatttttattttgca
gtgcgcagttttttaaatatccatgatatcatggatgaaaattatgtgatcttttcggaa
atgatggaagacggaaggtttcaaatcaagcttttttgcgtcaatccggcggtgaatctt
caaaattatctggaacagggaagcagtacgattttcttttctgcaacactgcttccggtt
cattactataaaaagctgcttagtgttgagaaagatgattatgcagtgtatgcacatagt
tcttttccgcaggaaaataaatttctttttattggaacggatgtaagtacccgttataca
agaaggggagagagtacatatcagagatttgccagatatattgcagtgatggcagaacag
aaaaaaggaaattatatggcgttttttccatcgtaccgttttttggaagaggtacatacg
tgctttttggagtgtgttgatcacgaagtcgacagtatctgtcaggtttcgtatatggat
gaagaacagagggaagagtttttggaggaatttgaacgggaaagagagaaaagtctggtt
gcattttgcgtgatgggcggaattttttcagaggggattgatctgacagaggacaagttg
atcggagcagtaatcgccgggacagggcttcctcaggtgtgtacagaacgggaaatttta
aagcagtattttaatgctgccgatatggatgggtttgactatgcgtatctgtatccggga
atgaacaaagttctgcagtctgccgggagggtgatccgaacggaaagtgacagaggtgtg
atcctgttgttggatgacaggtttcgggaaatgcgataccgggaagtgtttccgagagag
tggcagcagtatcaactgggaagtgtgaaaaatctggaacaagaaatacggactttctgg
gaaagtccgtaa
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