Mediterraneibacter gnavus: RGna_01265
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Entry
RGna_01265 CDS
T06719
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00230
Purine metabolism
rgn00240
Pyrimidine metabolism
rgn01100
Metabolic pathways
rgn01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RGna_01265 (nrdD)
00240 Pyrimidine metabolism
RGna_01265 (nrdD)
Enzymes [BR:
rgn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
RGna_01265 (nrdD)
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GFIT
Motif
Pfam:
NRDD
ATP-cone
Gly_radical
DZR
TackOD1
Zn_Ribbon_TF
Zn_ribbon_8
DUF1272
Sec8_C
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QHB22224
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All DBs
Position
241465..243585
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AA seq
706 aa
AA seq
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MIRVIKKDGTKEDFNVQKVVVAVNKSAYRALIKFTDEELDYICRFVEEKVQTLGIQDVPI
AEMHNVVEGALEKVNPVVAKSYRDYRNYKQDFVQMLDEVYKKSQSIMYIGDKENSNTDSA
LVSTKRSLIFNELNKELYKKFFLTVEEIQAIREGYIYIHDMSARRDTMNCCLFDVKNVLS
GGFEMGNLWYNEPKTLDTAFDVIGDIVLSAASQQYGGFTVPSVDEILEPYAEKSHKKLIE
KYRALGLDEEAVQKIAWSDLEKEMEQGFQGWEYKFNSVSSSRGDYPFITVTAGTRTSIYG
KLATIKMLEVRKNGQGKEGHKKPVLFPKIVFLYDENLHGPGKPLEDVFEAGIECSRKTMY
PDWLSLTGDGYVPSIYKKYGKIISPMGCRAFLSPWYERGGMKPADENDTPVFVGRFNIGA
ISLHLPMIYAKAQQEGKPFFEVLDYYLNLIRKLHQRTYDYLGEMKASTNPLAYCEGGFYG
GNLGLYDKIKPLLKSATASFGITALNELQQLHNKKSLAEDGAFAVETLEYINKRVEEFKN
EDGHLYAIYGTPAENLCGVQVQQFRKKYGIIENVSDREYVSNSFHCHVTEEITPIEKQDL
EGRFWNLSNGGKIQYVKYPISYNVDAIKSLVRRAMAKGYYEGVNLSLSYCDDCGHEELDM
DVCPECGSTNLTKIERMNGYLSYSRVKGDTRLNDAKMAEIAERKSM
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagtcatcaagaaagacgggacaaaggaagattttaacgtgcagaaagtagtt
gtggctgttaataaatctgcgtaccgtgcactcattaaattcacagatgaggagttggac
tatatctgtcgtttcgtagaagaaaaggtacagacattgggaattcaggacgtcccgatt
gcagagatgcataatgtggtagagggagccctggaaaaggtaaatccggtggtggcaaaa
agttatcgtgattatcgtaattacaaacaggactttgtacagatgctggatgaagtatat
aaaaagagccagtccatcatgtatatcggggataaagaaaacagcaacacggacagtgcg
ctggtatcaacaaagagaagtctgatctttaatgagctgaacaaagagctttataagaaa
ttcttcctgacagtagaagaaatccaggcgatccgtgaagggtatatttacattcacgat
atgtctgcgagaagagatacgatgaactgctgcctttttgatgtgaaaaatgtattaagc
ggcggatttgagatggggaatctctggtataatgagccgaagacactggatacagcattt
gatgtgatcggggatatcgtattaagtgcggccagccagcagtatggtggatttacagtg
ccaagtgtggatgagatcctggaaccatatgcagaaaaatctcacaaaaaactgattgaa
aaatacagagcgttgggtctggatgaagaagctgtacaaaagatcgcatggtcagatctg
gaaaaagaaatggaacagggattccagggatgggaatacaagtttaattcggtatcttcc
agccgcggagactatccgtttattactgtgacagccggaacacggacaagtatttatgga
aaactggcaacgatcaagatgctggaagtgagaaagaacggacagggaaaagaaggtcac
aaaaagccggtactctttccgaagatcgtatttttgtacgatgagaatctgcatggaccg
ggaaaaccgctggaagatgtgtttgaagcagggattgaatgctccagaaagaccatgtat
ccggattggttaagcctgacaggagatggttatgttccgagcatttacaaaaaatacggc
aagatcatcagcccgatgggatgtcgtgcatttctttctccatggtatgagaggggcggc
atgaagccggcagatgaaaatgatacaccggtatttgtgggaagatttaatatcggtgcg
atcagcttacatcttccgatgatctatgcaaaggcacagcaggaaggaaagccgttcttt
gaagtgctggattattatctgaatctgatccgcaagctgcatcagagaacgtatgattat
ctgggtgagatgaaagcctctacgaacccgctggcatattgtgaaggaggattctacggc
ggaaacttaggattatatgacaagatcaagccgctgttaaaatcagcgacagcttccttt
ggaattacagcacttaacgaactgcagcagcttcacaacaaaaagtcccttgcagaggat
ggggcatttgcggtggagacactggaatacatcaacaaacgtgtggaagaatttaagaat
gaagacggacatctgtatgcgatttacggaacaccggcagagaatctctgcggagttcag
gtgcagcagttccgcaaaaagtatggaatcattgaaaatgtatcggacagagaatatgtc
agcaacagttttcactgtcatgtaacagaagagatcacaccgattgaaaaacaggacctg
gaaggacgtttctggaacctgagcaacggcggaaaaatccagtatgtaaaatatccgatc
agttacaatgtggatgcgatcaaatctcttgtgagacgtgctatggcaaaagggtactat
gagggcgtcaatctgtcgttgtcttattgtgatgactgcggtcacgaagagctggatatg
gatgtatgtccggagtgcggaagtaccaatcttacaaaaatagaaagaatgaacggttat
ctctcttattccagagtcaaaggcgacactcggctcaatgacgcaaagatggcggagatt
gcagaaaggaagagtatgtaa
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