Mediterraneibacter gnavus: RGna_01620
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Entry
RGna_01620 CDS
T06719
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
rgn
Mediterraneibacter gnavus
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rgn03000
]
RGna_01620
Transcription factors [BR:
rgn03000
]
Prokaryotic type
Helix-turn-helix
Other families
RGna_01620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_11
Regulator_TrmB
HTH_IclR
MarR_2
HTH_7
Sigma70_r4_2
HTH_29
HTH_5
HTH_40
HTH_9
HTH_36
KORA
HTH_24
Hydrolase
HTH_46
MarR
HTH_28
DUF7343
DUF7342
RsmJ
HTH_10
HTH_23
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QHB22288
LinkDB
All DBs
Position
320914..321627
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AA seq
237 aa
AA seq
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MEQNQYVEYLLHFGLTRQEALIYVELLVKGKQTGYEIAKETGISRSNVYSVLAALAEKGA
AYVIEESAKRYIPVKVEEFCGNCIRRMQEEQEWMERNLPQKKAETEGYITIEGEQNILDK
AKNLIAQAGERVYLSCTAGYLDAFRQALEELVKKKRKVVILTDAPYELKDAIFYQTEEKG
QQIGLIVDSKSVLSGEYGKGSLNTCLYSGQKNFVTVFKNAMANEIKLIQLQKGGTVL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaatcagtatgtggaatacctgcttcatttcggactgacaaggcaggaggct
ctgatttatgtggaattacttgtaaaaggaaagcagacaggatatgagattgcaaaggag
acagggatttcccggtccaatgtgtattctgttctggcagcgctggcagaaaaaggagcg
gcctatgtgatcgaagagtctgcaaagcgctatattccggtaaaagtagaggagttttgc
gggaactgtatccgcaggatgcaggaggagcaggagtggatggagagaaaccttccacag
aagaaagcggagacagaaggatatatcaccattgaaggagaacagaatattctggataag
gcgaagaatctgatcgcacaggcgggggaaagagtgtatctttcctgtacagcaggatat
cttgacgcattccgtcaggcgttggaagagcttgtgaaaaagaagcggaaagttgtgatc
ctgacagatgccccgtatgaattgaaagacgcaattttctatcagacagaggaaaaagga
cagcagatcgggttgatcgtggattctaagagcgtgctttcaggggagtatggaaagggg
agcctgaatacctgtctgtattccggacagaagaattttgtaactgtatttaaaaatgca
atggcaaatgagataaaattgattcaattacaaaaaggaggaactgtattatga
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