Mediterraneibacter gnavus: RGna_04125
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Entry
RGna_04125 CDS
T06719
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00730
Thiamine metabolism
rgn00900
Terpenoid backbone biosynthesis
rgn01100
Metabolic pathways
rgn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RGna_04125 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RGna_04125 (dxs)
Enzymes [BR:
rgn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
RGna_04125 (dxs)
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
PFOR_II
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
QHB22738
LinkDB
All DBs
Position
complement(794837..796711)
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AA seq
624 aa
AA seq
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MLLEKIQKENDIKQLKPEELEKLAEEIRQFLVEKISVTGGHLASNLGVVELTMALHLAFE
LPQDKMIWDVGHQSYTHKILTGRRAGFDDLRKYGGMSGFPKRKESECDAFDTGHSSTSIS
AGLGYVAARDIKGEEHSVISIIGDGAMTGGMAYEALNNASRLKSNFIIVLNDNNMSISEN
VGGMSRYLNGLRTAEAYTGLKKGVEDTLMKIPVQGEKILYQMKKTKSGLKQLFVPGMFFE
DMGITYLGPVDGHDIRKLYKTFQEAKRVDHAVLVHVLTKKGKGYGPAEENPSRFHGIVPF
DIETGEAKEKSSKDSYTDIFSKVFCDIAKQNDAVVGITAAMADGTGLARFARMFPDRFFD
VGIAEEHALTFAAGLAAGGLKPVVAVYSSFLQRAFDQAIHDVCLQNLPVMIAVDRAGLVG
SDGETHQGLFDLSFLNMIPNMTILSPKNRWEMADMVRFCADFQYPVALRYPRGAAYEGLS
AFRTPIVYGKSEILYEEEDIAVIFVGHMAELAVQVRDRLKEIGYHCSLINARFVKPLDTE
MLEALTKDHRLFVTIEENVLSGGFGEQVLHYVSRAKLDVGVRCIGIPDDYVEHGNVDLLR
REVGLDAETIVKQIIADYVTIGKD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgctattagaaaagattcaaaaagaaaatgatatcaaacagttaaagccggaggagctg
gaaaagctggcagaagaaatccgtcagtttcttgtggagaaaatcagtgtcacaggcggg
catctggcatcgaatctcggtgtggtggagctgacgatggcgctgcatctggcgtttgaa
ctgccgcaggataagatgatctgggatgtgggacatcagtcctacacacacaagatcctg
acaggacggcgcgccggatttgacgatctgagaaaatatggcggcatgagcggatttcca
aagcgaaaggaaagtgaatgtgacgcatttgataccggacacagctccacctctatttcc
gcaggcctcgggtacgtggcggcgagagatatcaagggagaagaacacagcgtgatctct
atcatcggagatggagccatgaccggagggatggcatatgaggcactgaacaatgcgtcc
cgtttaaaaagcaattttatcattgtattaaatgacaacaatatgtcaatttctgaaaat
gtgggcgggatgtccagatatttgaacggactgcgcacggcagaggcatatacgggactg
aaaaagggtgttgaggataccttgatgaagattccggtacagggtgagaagatcctgtac
cagatgaaaaagacgaaaagcggactcaagcaattatttgttccgggtatgtttttcgag
gatatgggaatcacctacctgggaccggtggacgggcatgatatccgaaagctgtataag
acatttcaggaggcgaagcgggtagatcatgcagttctggttcatgtactcaccaagaaa
ggaaagggatacggtcctgcggaggagaatccatccagatttcatgggatcgttccgttt
gacattgagaccggggaggcaaaagagaagagctctaaggacagctataccgatattttt
tccaaagtattctgtgatattgcaaagcaaaatgatgcagtagtcggaattacagcagcc
atggcggatggaaccggacttgccagatttgcaaggatgtttccggatcggttctttgat
gtcgggattgcagaagagcatgcgctgacctttgcagcagggctggcagcagggggacta
aagccggttgttgcggtgtattcctcgtttttgcagcgggcgtttgaccaggcgattcat
gatgtgtgcctgcagaacctgccggtgatgattgcagtggacagagccggtctggtgggc
agtgacggagagacacatcagggacttttcgatctgtcatttctgaatatgatcccgaat
atgacgatcctttcaccgaaaaacagatgggagatggcggatatggtgcggttctgtgcg
gatttccagtatccggtggcactgcgttatccaagaggcgccgcttacgagggattgtcg
gcgtttcgtactccgatcgtctatggaaaaagtgagatcctttatgaagaggaggatatt
gcggtgatctttgtagggcacatggcagagctggcagttcaggtgcgtgacagactgaaa
gagatcggatatcattgctcactgatcaatgccagatttgtaaagcctctggatacagag
atgctggaagctctgacaaaggatcacagactttttgtgacgattgaagaaaatgtattg
tccggcggatttggagaacaggtacttcactatgtatcgagagcaaagctggatgtaggt
gtcagatgcatcggaattccggatgactatgtagaacacggcaatgtagacttgctgcgc
agggaagtcggactggatgcggagacgattgtaaaacagattattgcagattatgtgacg
ataggaaaagattga
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