Mediterraneibacter gnavus: RGna_04410
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Entry
RGna_04410 CDS
T06719
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rgn
Mediterraneibacter gnavus
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgn03032
]
RGna_04410
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_04410
Enzymes [BR:
rgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RGna_04410
DNA replication proteins [BR:
rgn03032
]
Prokaryotic type
DNA Topoisomerases
RGna_04410
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGna_04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Rhv_5
Motif
Other DBs
NCBI-ProteinID:
QHB22790
LinkDB
All DBs
Position
complement(848905..851148)
Genome browser
AA seq
747 aa
AA seq
DB search
MSSESQIIRTEYSDVMRKSYIDYAMSVIISRALPDVRDGLKPVQRRTLYDMYELGIRYDK
PYRKCARIVGDTMGKYHPHGDSSIYESLVVMAQEFKKGMVLVDGHGNFGSIEGDGAAAMR
YTEARLTKFTQEAYLADLDKDIIDFGPNFDETEKEPLVLPVRVPNLLINGAEGIAVGMAT
SIPTHNLGEVIDAVKAYMKNDAITTKQLMKYIKGPDFPTGGIVVNKDDLPEIYETGQGKI
KIRGKVEVEDLKGGKKQLVITEIPYTMIGAGIGKFLNDVCNLVETKKTTDIVDISNQSSK
EGIRIVLELKKGADVENLKNMLYKKTRLEDTFGVNMLAVANGRPETLGLKAIIEHHVDFQ
FELTTRKYKTLLAKELDKKEVQEGLIKACDVIDLIIEILRGSKSVKDAKACLTQGITENI
KFKSQISKKMAAMLRFTERQASAILEMRLYKLIGLEIEALQKEHETTLKNIARYEDILNH
YDSMATLIMEELDAFKKEYGRKRRTAIENAEAAVFEEKKVEEQEVIFLMDRFGYAKTVDV
SVYERNKEAADSENKYVVNCLNTGKICLFTDTGKMHQIKVMDLPYGRFRDKGVPIDNVSN
YSSSEEQIVTICDAQQIAFEKLLFATKQGMIKRVDGSEFQVAKRTIAATKLQEEDALIHV
GMVQENQNIVLQTRDGYFLRFLTAEIPEKKKGAVGVRGIKLQKTDELEQIHLFEEGTDTK
VKYGEKEVTLNRLKLAKRDGVGTKQRK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgaatcacagataatcagaacagaatactcggatgtgatgcgcaagtcctat
attgattatgcgatgagtgtcatcatatcccgtgcccttccggatgtgagagacggactg
aaaccggtacagagacggacactttacgatatgtatgaattagggatccgctatgacaag
ccataccggaaatgtgcccgtatcgtgggagatacgatgggtaaatatcatcctcatggt
gatagttccatttatgagtctttagtggttatggcacaggaattcaaaaagggaatggtg
ctggtggacggacatggaaattttggttccatcgaaggcgacggagcagctgccatgcgt
tatacagaagcacgtctgaccaagtttactcaggaggcataccttgcggatctggacaag
gatatcattgatttcggaccgaactttgatgagacagaaaaagaacctctggtacttccg
gtgcgggttccgaatcttcttatcaatggagcggaaggaatcgcagtcggaatggcaacg
agtatcccgacacacaatctgggagaagtcattgatgcggtaaaggcttatatgaaaaat
gacgccattacgacaaaacagctgatgaaatacatcaaaggaccggattttccgacaggc
ggtattgtggtcaataaagatgatcttcctgaaatctatgagaccggacaggggaagatc
aagatccgcggaaaggtagaagtagaagatttaaaaggcggtaaaaaacagcttgtcatt
acagaaattccatataccatgatcggagccggaatcggaaagtttttgaatgacgtctgc
aatcttgtagaaacaaaaaagacaacagatatcgtggatatttccaaccagtcttccaaa
gaaggaatccggatcgtactggaactgaaaaaaggcgcggatgtggaaaatctgaaaaat
atgctctacaaaaagacgcgtctggaggatacattcggagtcaatatgctggccgtggca
aacggaaggccggaaacgctgggattaaaggcgatcattgagcatcatgtggattttcag
tttgagctgaccacgagaaaatacaaaacgcttctcgcaaaagaactggataaaaaagaa
gtgcaggaaggtttgatcaaagcctgtgacgtgatcgatctgatcattgagattctgcgg
ggaagcaagtctgtcaaagatgccaaagcatgtctgacgcagggaatcacagagaacatc
aagtttaaatctcagatttcgaaaaagatggcggctatgctccgttttacggaaagacag
gcatctgcaattctggaaatgcggttgtataaactgattggtctggaaattgaagcgctg
cagaaagaacacgagacaacgctgaaaaatattgcccgctatgaagatattttgaatcat
tatgattccatggcaacgctgatcatggaagagctggatgcatttaaaaaagagtatgga
agaaagcgccgtactgcgattgaaaatgcagaggcggcagtgtttgaagaaaagaaagta
gaagagcaggaagtgatctttttgatggatcgcttcgggtatgcgaaaacagtggatgtg
agtgtgtatgagcgaaacaaagaggcggcagacagtgagaataaatatgttgtaaattgt
ctgaataccggaaaaatctgtctgtttacggataccggaaaaatgcatcagatcaaagtg
atggatctgccatatggaagattccgggataaaggcgttccgattgacaatgtgagcaat
tacagcagcagtgaagaacagattgtgacgatctgtgacgcacagcagatcgcgtttgag
aagcttttgtttgccacaaagcaaggaatgatcaagcgagtagacggcagtgagttccag
gtggcaaaacgaaccattgcagcaaccaagctccaggaagaggatgcactgatccatgtt
gggatggttcaggagaatcagaatattgtgctgcagacaagagatggatatttcttaaga
tttctgacagcagagattccggaaaagaaaaaaggtgcagtcggcgtgcgcggaatcaag
cttcagaaaacggatgagctggagcagatccatctgtttgaagagggaacagatacaaaa
gtgaaatatggagaaaaagaagtgaccttgaaccgtctgaaactggctaagagagacggt
gtcgggacgaagcagaggaaatga
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