Mediterraneibacter gnavus: RGna_04620
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Entry
RGna_04620 CDS
T06719
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00550
Peptidoglycan biosynthesis
rgn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGna_04620
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rgn01002
]
RGna_04620
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
RGna_04620
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RGna_04620
Peptidases and inhibitors [BR:
rgn01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RGna_04620
Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RGna_04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Transpeptidase
Beta-lactamase2
Peptidase_S13
Kv2channel
Motif
Other DBs
NCBI-ProteinID:
QHB22827
LinkDB
All DBs
Position
complement(894009..895415)
Genome browser
AA seq
468 aa
AA seq
DB search
MKAKKVLSGALAAILLTLTPGVAVCAEEMAGQEQTENTQVLSAQEQENQEKAASYAEKID
TNEISNWPQGPAIYAASGIVMDMNSGAVLYAKKAEEKRYPASITKVLSVLTALQYAKMSD
TVVFSEDSISFLQWDDAQIGMKPGEEISMESALYGMLLASANEVSYAVAENVGKQYLNGG
YAEFIEEMNRISQELGCTSSNWVNANGLHDDNHYTTAHDMARIAAAAYQNEEFRRLETPL
EYKVPPTNLTAEERILDQNHKMLWPENYYYYANAKAGKTGYTDQSKTTLVTMAEGNDMQL
AAVVLHTYGVDAYTDTRFMYDYAFTNFERLNLRECETSSDIESFDKEDAYVVVPKGVSFS
ELEKEYVPNEKEGVRQAAVEYFYHGQPVGSAKATLTEEAFSALTGSDKKIKIESVKQEKK
AEKSEQTEQKKLSKLTVVLALAVILPLGYIILVVILYKLNMRWRNRKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaagaaagttctctcaggcgcattggcagcgattcttttgactcttacaccg
ggtgtggctgtgtgtgcagaggagatggccgggcaggagcagacggaaaatacacaagta
ctgtctgcacaggagcaggaaaaccaggaaaaagcagcatcttatgcggagaaaatagat
acaaacgagatttcgaactggccacagggacccgcgatctatgcggcttccggcattgtg
atggacatgaacagcggggcagtgctttatgcaaaaaaggccgaagaaaaaagatatcct
gcgagtattacgaaagtgttgagtgttttgactgcattacagtatgcgaaaatgtccgat
accgttgtgttttcagaggacagtatttcttttttgcagtgggatgatgcgcagatcggg
atgaagcccggggaagaaatcagcatggagtcagcactttatgggatgcttctggcttcg
gcaaatgaagtctcctatgcggtggcggaaaatgtaggaaagcagtacttaaatggcgga
tatgcggagtttatagaagagatgaaccggatatctcaggaattgggatgtaccagttca
aactgggtcaatgcaaatgggcttcatgatgacaaccactatacaacagcgcatgatatg
gcgagaattgcagcggcagcttatcagaatgaagagtttcgaagactggagacaccgctg
gaatacaaagttccaccgacgaatctgactgcggaagaaaggattctggatcagaatcat
aaaatgctctggccggaaaactattattactatgcgaatgcgaaagcgggaaagaccgga
tatacagatcagtcaaagacaacgcttgtgacgatggcggaaggaaatgatatgcagctg
gcagcggtggtgcttcatacatatggagtagatgcttatacggatacgaggtttatgtat
gattatgcatttacaaattttgaaaggctgaatctgagggaatgtgaaacttcatcagat
attgaaagttttgacaaggaagatgcctatgttgtggttccaaagggcgtttcgttttca
gaattggaaaaagagtatgttccaaatgaaaaggaaggagtaagacaggctgcggtagag
tatttttatcacggacagccagtggggagtgcgaaagcaacattgacagaagaagcgttt
tccgcattgacaggatctgataaaaaaataaagatcgagtcggtaaaacaggaaaagaag
gctgaaaaatcagagcaaacagagcagaaaaagctgtcaaaactgacagttgtgcttgca
ctggcagtaattttgccattaggatatattattctggtcgttattttgtataaactaaat
atgaggtggagaaaccggaaaaagtag
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