Mediterraneibacter gnavus: RGna_05065
Help
Entry
RGna_05065 CDS
T06719
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00470
D-Amino acid metabolism
rgn00550
Peptidoglycan biosynthesis
rgn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RGna_05065
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGna_05065
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
RGna_05065
Enzymes [BR:
rgn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RGna_05065
Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
Precursor biosynthesis
Amino acid ligase
RGna_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_8
AlaDh_PNT_C
DAO
NAD_binding_7
Pyr_redox_2
FAD_oxidored
3HCDH_N
GIDA
Pyr_redox_3
FAD_binding_3
Pyr_redox
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
QHB22912
LinkDB
All DBs
Position
complement(994654..996012)
Genome browser
AA seq
452 aa
AA seq
DB search
MKFKDKKVLVFGSGISGVSAAALLLQEGAEVVLYDGNDRLDAAGIKEQIEGQAKGSVSVV
LGAFPEALLSELSLVVMSPGVPTDLPSVNQMRDAGIPIWGEIELAYVLGKGDVLAITGTN
GKTTTTALLGAIMKNFRESTFVVGNIGNPYTSVVRETKDDSVIVAEMSSFQLETIHTFCP
KVSAILNITPDHLNRHHTMEAYIEAKEQIAKNQTEEDVCVLNYEDDVTRKFGERVKAQVI
YFSSRRRLEKGIYLEDGNIIYCRENPEKVCHVDELKLLGMHNYENVMAAVAMAAAYHVPM
EIIRKTIREFTAVEHRIEFVAEKNGVAYYNDSKGTNPDAAIKGIQAMNRPTFLIGGGYDK
DSSYDEWIQSFDGKVKKLVLLGATKEKINETAKRLGFTDTILADTFEEAVNICVEQAEPG
DAVLLSPACASWGMFKNYEERGDKFKELVNQL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttaaagacaaaaaagtactggtgtttggttccggtatcagtggtgtttctgct
gcggctctgctgctgcaggaaggtgcagaagtcgtattgtatgatgggaatgacaggttg
gatgcggcaggaatcaaagaacagatcgaaggacaggcaaaggggagcgtaagcgttgtt
ctcggagcatttcccgaggcgcttctttcagagctttctctggttgtgatgagtccgggt
gttccgacagatttaccatcggtgaatcagatgcgggatgcagggattccgatctggggt
gaaattgaactggcatatgtccttggtaaaggggatgtgctggcaatcaccggaacaaat
ggaaagacgaccacgacagcactgcttggtgcaatcatgaaaaatttccgggaaagcaca
tttgttgtaggcaatatcggcaatccttacacgagcgttgtgcgggagacaaaggatgat
tctgttattgtggcagagatgagcagttttcagcttgagacgattcacacattctgtccc
aaagtcagtgcgatcttgaatatcacgccggatcatctgaaccgccatcacacgatggaa
gcttatatcgaagccaaagagcagattgcaaaaaaccagacagaagaagatgtctgtgtt
ttgaattatgaggatgatgtgaccagaaaattcggagaaagagtcaaagcgcaggtgatt
tatttttccagccgccgcagactggaaaaaggaatttatctggaagatggcaatatcatc
tattgcagagaaaatccggagaaagtctgtcatgtggatgaattaaaactgcttggaatg
cataattatgaaaatgtaatggcagctgtggctatggcggcagcgtatcacgttccgatg
gagatcatccgtaagaccattcgggaatttacggcagtggaacatcggatcgagtttgtg
gcagaaaagaacggggttgcatattacaacgactccaaaggcacaaatccggatgccgcg
atcaaaggaatccaggcaatgaacaggcctacatttttgatcggcggaggatatgacaag
gattcttcttatgatgagtggattcagtcttttgacggtaaggtaaaaaaactggtgctt
ctcggagcgacaaaagagaagatcaatgagacggcaaaaaggctgggatttacagatacg
attcttgcagatacgtttgaagaggcggtcaatatctgtgtagaacaggcagaacccgga
gatgcagttcttttgtctccggcgtgtgcaagctggggaatgtttaagaattatgaagaa
cgcggagataaattcaaagaacttgtaaatcaattataa
DBGET
integrated database retrieval system
