Mediterraneibacter gnavus: RGna_05550
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Entry
RGna_05550 CDS
T06719
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00860
Porphyrin metabolism
rgn01100
Metabolic pathways
rgn01240
Biosynthesis of cofactors
Module
rgn_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGna_05550 (cobD)
Enzymes [BR:
rgn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
RGna_05550 (cobD)
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Motif
Pfam:
CobD_Cbib
DUF5324
HrpB4
Motif
Other DBs
NCBI-ProteinID:
QHB22992
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All DBs
Position
complement(1084831..1085790)
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AA seq
319 aa
AA seq
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MRILLACMTGFGLDLIFGDPYWLYHPIRLIGHLISFLEKPLRSAAGKSPKKQIVAGGILW
LLVILISTGIPCLMLWAAEKIHPAVSFLLECFWCYQILAARSLSVESKKVYHALKTQDVE
GARKAVSMIVGRDTKSLTEEGIAKAAVETVAENTSDGVTAPLMFLMLGGAPLGFLYKAVN
TMDSMLGYKNEKNLYFGRVAAKMDDVFNYLPSRVSAVLMIAAAFLTGMDAKKAAQIYKRD
RRKHASPNSAQTESVCAGALQVQLAGDAWYFGVLHKKETIGDPIRPVEAEDIKRAGRLMY
VTAVLTLLFAGMIRFWYFW
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattacttgcatgtatgacaggatttggactggatttgatctttggcgatcct
tactggctgtatcacccgataaggctgatcggacatctgatttcttttttggaaaaaccg
ctgcgaagtgcggcgggaaaatcaccgaaaaaacagattgtggcagggggaattctgtgg
ctcctggtgattttgatcagtaccgggattccatgtctgatgctgtgggcggcagagaag
atccatccggctgtttcgtttcttctggaatgcttctggtgttaccagatcctggcggca
cgttcactttctgtggagagtaagaaggtataccatgctctgaaaacacaggatgtggag
ggggcaagaaaagcagtttccatgattgtaggaagagataccaagtcgcttacagaagaa
gggattgcaaaggcagcagtggaaactgtggcagaaaatacatcagacggtgtgactgcg
ccgctgatgtttctgatgcttggcggtgcaccgcttggattcctctataaagcggtcaat
acgatggattcgatgctgggatataagaatgaaaaaaatctctatttcgggagagtggcg
gcaaagatggatgacgtgtttaattatctgccatccagagtatcggcagttctgatgatc
gcggcggcatttctgacaggaatggatgcaaaaaaggcagcgcagatttataaaagagac
cggagaaagcatgccagtccgaattctgcgcagacggaatcagtctgtgcaggggcgctt
caggtgcagctggcaggagatgcatggtattttggtgtactgcataaaaaagagacgatc
ggagatccgatccgtcctgtcgaggccgaagacatcaaacgggcaggaaggctgatgtat
gtgacagcagtgcttaccctgctgtttgcaggaatgatccggttctggtatttctggtaa
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