Mediterraneibacter gnavus: RGna_06310
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Entry
RGna_06310 CDS
T06719
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RGna_06310 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_06310 (priA)
Enzymes [BR:
rgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGna_06310 (priA)
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RGna_06310 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
Zn_ribbon_6
SLFN-g3_helicase
Zn_Ribbon_TF
TrwB_AAD_bind
HEAT_ULK4
ADDB_N
Zn_Ribbon_YjdM
zf-CHY
AAA_22
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QHB23131
LinkDB
All DBs
Position
complement(1263983..1266211)
Genome browser
AA seq
742 aa
AA seq
DB search
MFADIIVDIKHEKLDRIFQYRIPEWLKEELNVGMEVVIPFGKGNRQTKGYVVGISETCDY
DLSKVKEIEDISRNSVEIEAKLIALAAWMKEHYGGTMIQALKTVLPIKQKENAKIKKYVR
LLLGKERAEAQLHYYQQKNQKARARLLEALLEDPVIEYELITKKLNITRSVVNALEEQQV
AVLESEQVFRNPVKEKEQRAKTLVFTAEQEHAIECFWQEYSRDVRAAYLLYGVTGSGKTE
VYIEMIRRVVSEGKQAIVLIPEIALTYQTVMRFYRRFGNRVSILNSRMSAGERYDQLMRA
KAGEIDVMIGPRSALFTPFPELGLIVIDEEHETTYKSEQIPRYHARETAIERANLEHASV
VLGSATPSLEAMYRSKNGEYRLLELKNRSGMQKMASVYVADLRQELKEGNRSILSRHLQE
LMEDRLEKQEQIMLFLNRRGYAGFLSCRECGHVVKCPHCDVSLSYHRNGKMVCHYCGYEE
PRTPVCPECGSRHIGEFRAGTQQIEDIVKAQFPQARVLRMDMDTTRQKDGHEKILSAFAN
GEADVLVGTQMIVKGHDFPNVTLVGVLAADMSLYSDDYRSGERTFQLLTQAAGRAGRGQK
EGEAVIQTYTPTHYSIVTAAAQDYEAFYEEEIRYRQIMGYPPVENLLAVLVSCEDEVLLE
TGCKYLKEFSIRIAPKETAKIIGPASPGIGKINDVYRKVIYIKDENYDTLVRIKNGLEQY
IEVNPGYRKMRIQFDFNPMHVF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcagatattattgtagatataaaacatgaaaaactggatcggatctttcaatat
cgaattccggagtggttaaaagaagagctgaatgtgggaatggaggttgtgattccgttt
gggaaaggcaaccggcagacgaaaggctatgtggtaggaatttcagagacttgcgactat
gatctttccaaagtcaaggagatcgaagatatttccagaaatagtgtagagatcgaggcg
aagctgatcgcgctggcggcatggatgaaagaacattatggcggaacgatgatccaggca
ctcaagacggtattgccgatcaaacaaaaagagaatgccaagatcaaaaagtatgtccgt
ctgctgcttggcaaagaacgggcagaagcgcagctgcattattatcagcagaagaatcag
aaggcgagagcaagacttctggaagcacttctggaggatccggtcattgaatacgaactg
attacgaaaaaactgaatattacgcgcagtgtcgtcaatgcattggaagaacagcaggtg
gcagttctggaatcagagcaggtgtttcgaaatccggtgaaagaaaaagagcagagagca
aaaactcttgtgtttacggcagagcaggagcatgcgatcgagtgcttctggcaggagtac
agcagagatgtgcgggcagcttatttgttgtacggtgtgaccggcagtggaaaaacggaa
gtttatattgagatgatccgccgggtggtcagtgagggaaaacaggcgattgtcctgatt
cctgagattgcactgacgtatcagacagtgatgcggttttaccggcgttttggaaatcgg
gtatccatcttaaattccagaatgtctgccggagagcgttatgatcagttgatgcgggca
aaagcgggagagatcgacgtgatgatcggcccgcggtccgccttgtttacaccatttccg
gagctggggctgatcgttattgatgaggaacatgaaacaacttataaaagtgaacagata
ccaagatatcatgccagagagactgccatagagcgggcaaatctggaacatgccagcgta
gtacttggctcggcaaccccgtctctggaagcaatgtatcgctcaaaaaacggggagtac
cgcctgctggaattgaagaaccgttcgggaatgcaaaagatggcgagcgtctatgtagcg
gatctcaggcaggagttaaaagaaggcaaccgttcgatcttaagccggcatctgcaggag
ttgatggaagaccggctggaaaaacaagaacagatcatgttgtttttaaacaggagaggg
tatgcagggtttctttcctgcagagagtgcggccatgtggtaaagtgtccgcactgcgat
gtttcgctgtcgtatcacagaaacggaaagatggtctgtcattactgcggatatgaagaa
ccaaggacacctgtctgcccggagtgcggctccagacatatcggagaatttcgggcagga
acacagcagatcgaagacattgtaaaagcacagtttccgcaggcaagagttcttcgtatg
gacatggacacaacaagacagaaagacggccatgaaaaaatcttgtctgcatttgcgaat
ggagaagcagatgtactggtcggaacgcagatgatcgtaaaaggacacgattttccgaat
gttacgttagttggtgtgctggcggcagatatgtcgttgtattcagatgattatcgttcc
ggggagcgcaccttccagcttttgacacaggcggcagggcgagccggacgggggcagaaa
gaaggagaagctgtgatccagacctacactcccacgcattacagtatcgtaaccgccgca
gcacaggattatgaggcgttttatgaggaggagatccggtatcggcagatcatgggatat
cccccggtagaaaatctgcttgcagttctggtaagctgtgaggatgaggtgctgttagag
acagggtgtaagtatttaaaagagttttcgatccggattgctccgaaagaaactgcgaag
atcatcggacctgcaagtccgggaatcggaaagattaatgatgtgtatcgcaaagtaatc
tacataaaagatgaaaattatgatacacttgtgaggataaagaacggattggaacaatat
attgaagtaaatccgggatatcgcaagatgcggattcagtttgatttcaatccgatgcat
gttttttaa
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