Mediterraneibacter gnavus: RGna_07660
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Entry
RGna_07660 CDS
T06719
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn02020
Two-component system
rgn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RGna_07660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGna_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rgn03000
]
RGna_07660
Transcription factors [BR:
rgn03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RGna_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_24
MarR
MarR_2
HTH_36
HTH_29
HemN_C
HTH_23
HTH_11
TrmB
RepL
HTH_28
HTH_DeoR
HTH_41
wHTH-PRTase_assc
GntR
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QHB23373
LinkDB
All DBs
Position
complement(1503485..1504246)
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AA seq
253 aa
AA seq
DB search
MGTDRLYQVLPIMRELKKERREEVEQFFQDAPDWLLDSFRVVELDKNVVFIRENQPVDTV
HIIVRGMFKITDYRVYGIAYDFMQFDGINAMGGMELIMDLDTYQATLQTITPCTSIRIPA
DVYARWLRTDIRALKQEAKIMGHYLYEQGVTSRTYMFVPGTDRVAVLFEHRYKKYAKNGK
LTFTNTRQELAEYSGLSVKTVNRAVKKFEEQGLISRSGKTFYIDEGQYEQLHALVSKLIE
PLIERGRNDEPDL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagatcgtctatatcaagtgctccctattatgcgggagctgaaaaaagaacga
cgggaagaggttgaacagttttttcaggatgctccagattggctgctggattctttccgt
gtggtggaactggataaaaatgttgtatttatcagagaaaatcagccagtagataccgta
cacattattgtgagggggatgtttaaaatcacagactaccgggtatacggcattgcctat
gactttatgcagtttgacgggatcaatgccatgggcgggatggagctgatcatggatctg
gatacgtatcaggcaaccctgcagacgatcacaccgtgtacgtcgatccgcattccggcc
gatgtctatgcaaggtggcttcgcacagatatccgtgcgctgaagcaggaagccaagatc
atgggacattatctgtatgagcagggagtgaccagccggacctatatgtttgtgccgggg
acagaccgggtggcggttctttttgaacacagatataaaaaatatgcaaaaaacggaaaa
ttaacatttaccaatacaagacaggaactggcagaatattcgggcttaagtgtaaagacc
gtgaaccgtgcggtaaaaaagtttgaagagcaggggctgatcagccgtagcggaaaaaca
ttttatattgatgaagggcaatatgagcagcttcatgcactggtatccaaattaattgag
ccattgatagaaaggggtcgaaatgatgaaccagatttatga
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