Mediterraneibacter gnavus: RGna_08105
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Entry
RGna_08105 CDS
T06719
Name
(GenBank) sugar fermentation stimulation protein SfsA
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGna_08105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_08105
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
RGna_08105
DNA repair and recombination proteins [BR:
rgn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGna_08105
Prokaryotic type
RGna_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SfsA
SfsA_N
HhH-GPD
NUDIX_4
HHH
CLIC-like_N
DUF8371
NOV_C
Y_helicase_C
Motif
Other DBs
NCBI-ProteinID:
QHB23457
LinkDB
All DBs
Position
complement(1587984..1589717)
Genome browser
AA seq
577 aa
AA seq
DB search
MKYERIERATFLERPNRFIAYARIAGKQETIHVKNTGRCAELLVPEAEIFVQESDNPERK
TKWDLIGVRKGNRLINMDSQIPNKVVEEWLRAGNLFLEPVTVRPETTYGNSRFDFYVESG
EKKAFIEVKGVTLEEDGVVRFPDAPSERAVKHMEELIRAKKEGYDAYVFLVIQMKGVRYF
TPNMDTQPEFGEVLKKAKAAGVKILAYDCQVTEDSIKIDEEVPVVLEKPILWETVDPIVA
WYRENKRDLPWRHDVTPYRVWVSEIMLQQTRVEAVKPYYDRFLKELPTITDLANAKEDRL
MKLWEGLGYYNRVRNMQKAAIQMVEQYGGQFPESYEEIHALTGIGNYTAGAIGSFAFGIP
KPAVDGNVLRVVSRILASREDIMKAKVRTAIETALEEVIPKDCPGDFNQGLIELGAIVCV
PNGEPKCEICPAAEICRARKEGIAMELPVKTKAKGRKIEKRTVLVFHDSDTLAIQKRPDK
GLLAGLYELPNLEGWLSQQEVIEYSKSIGLSPIRIKKLPAAKHIFSHVEWQMKGYEIQVD
ELEKNCSKEMIFAKEEVLKEKYSIPSAFEAYCVWKQK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgagagaatagagcgggcgacatttctggaacggccgaaccgttttattgcg
tatgccaggattgcaggaaaacaagagacgatccacgtgaagaatacaggcaggtgcgcg
gaacttcttgtgcccgaagcagagatttttgtgcaggagagtgacaacccggagcgaaag
acaaaatgggatctgatcggggtgagaaaaggaaatcgtctgatcaatatggattcccag
attccaaacaaagtcgtggaagaatggctgcgtgcaggcaatttgtttcttgaaccggtg
acggttcgcccggagacaacatacggcaactcccgatttgatttttatgtggagtcggga
gaaaagaaagcgtttatcgaggtcaagggagtgaccctggaagaggatggtgttgtgcgt
tttccggatgcgccgagtgagcgggcagtaaagcatatggaagaactgatccgtgcaaaa
aaggaaggatacgatgcttatgtatttctggtgatccagatgaaaggcgtccgctatttt
acaccgaatatggatacacagccggaatttggtgaagtactgaaaaaagcaaaagcagca
ggggtaaagattctggcgtatgactgtcaggtgacagaagattcgatcaaaatcgatgaa
gaagttccggttgtattagagaaaccgattttgtgggaaaccgtagatccgattgtagcc
tggtatcgtgaaaataagcgggatctgccgtggaggcatgatgtgacgccgtaccgagtg
tgggtgtctgagattatgctgcagcagactagggtggaagcagtgaagccgtactatgac
cggtttttaaaggaacttccgacgatcacggatctggccaatgcaaaagaggaccggctg
atgaagctgtgggaagggcttggatattacaaccgggtccgcaatatgcagaaagctgcg
atccagatggttgagcagtatggcggtcagtttccggaatcatatgaagaaatccatgca
ctgacaggaattggaaattatacggcgggagctatcggatcttttgcgtttggaatacca
aaaccggcggtggatggaaatgtgctgcgtgtggtgtcccggattctggcaagcagagaa
gatattatgaaagccaaagtccgtacggcgatagagacggcactggaggaagtgattcca
aaagattgtccgggagactttaatcagggattgatcgagcttggtgcgatcgtatgtgtg
ccaaacggagagccaaagtgcgagatctgtccggcagcagagatctgccgtgccagaaaa
gaaggaatcgcaatggagcttccggtcaaaacaaaagcaaagggaagaaaaatcgaaaag
aggacggtacttgtatttcatgacagtgatactctggcaattcagaaacgtccggacaaa
ggacttctcgcgggattatacgaactgccgaatctggaaggctggctgagtcaacaagaa
gtgatcgagtacagcaagtccatcgggctttctccgatccgtatcaaaaaacttccggct
gcgaagcatattttcagtcatgtagaatggcaaatgaaagggtatgagatccaggtggat
gagctggagaaaaactgcagcaaggaaatgatttttgcaaaagaagaagtattaaaggaa
aagtattcgattccatctgcgtttgaggcatattgtgtgtggaaacaaaaatag
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