Mediterraneibacter gnavus: RGna_08355
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Entry
RGna_08355 CDS
T06719
Name
(GenBank) sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00511
Other glycan degradation
rgn00600
Sphingolipid metabolism
rgn01100
Metabolic pathways
rgn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
RGna_08355
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RGna_08355
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
RGna_08355
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
RGna_08355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sialidase
BNR_2
BNR_3
BNR
Sortilin-Vps10
Laminin_G_3
Methuselah_N
Motif
Other DBs
NCBI-ProteinID:
QHB23506
LinkDB
All DBs
Position
complement(1626462..1628633)
Genome browser
AA seq
723 aa
AA seq
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MNKYKKIVSIAATAVMCVAPMSVYAQEAQTDVIEAVAEKKQDTESSSVPVLQKEGIEISE
GTGYDLSKEPGAATVKALEQGTIVISYKTTSENAIQSLLSVGNGTKGNQDRHFHLYITNA
GGVGMELRNTDGEFKYTLDCPAAVRGSYKGERVSNTVALKADKENKQYKLFANGELIATL
DQEAFKFISDITGVDNVMLGGTMRQGTVAYPFGGSIERMQVYRDVLSDDELIAVTGKTIY
AENIFYAGDATKSNYFRIPSLLALDSGTVIAAADARYGGTHDAKSKINTAFAKSTDGGKT
WGQPTLPLKFDDYVAKNIDWPRDSVGKNVQIQGSASYIDPVLLEDKETHRVFLFADMMPA
GIGSSNASVGSGFKEVDGKKYLKLHWKDDAAGTYDYSVRENGTIYNDTTNSATEYSVDGE
YNLYKNGNAMLCKQYDYNFEGTKLLETQTDTDVNMNVFYKDADFKVFPTTYLAMKYSDDE
GETWSDLQIVSTFKPEESKFLVLGPGVGKQIANGEHAGRLIVPLYSKSSAELGFMYSDDH
GNNWTYVEADQNTGGATAEAQIVEMPDGSLKTYLRTGSGYIAQVMSTDGGETWSERVPLT
EIATTGYGTQLSVINYSQPVDGKPAILLSAPNATNGRKNGKIWIGLISETGNSGKDKYSV
DWKYCYSVDTPQMGYSYSCLTELPDGEIGLLYEKYDSWSRNELHLKNILKYERFNIDELK
VQP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtataaaaaaattgtttctatagcagcaactgcagtgatgtgtgttgcacca
atgagtgtatatgcccaagaggcccagacagatgtgattgaggctgtagcagagaagaaa
caagatacagaatcttcttcggtaccagtgttgcaaaaggaaggaatcgaaatctcggaa
ggtacaggatatgatttgagtaaagaacctggggcagcaacagtaaaagcattggaacag
ggaactatcgttatctcctataaaacaaccagtgaaaatgcgattcaatcgttattgagt
gtgggaaatggtacaaaaggaaatcaggatagacatttccacttatatatcacaaatgca
ggcggcgtaggtatggaattgagaaatacagatggcgagtttaaatatacgctggattgc
ccggctgctgtgcgtggtagttataagggggaaagagtatccaacacagttgcattaaaa
gcggacaaagaaaataaacagtacaagctatttgcaaatggcgaattaatagcaacgctg
gatcaggaggcatttaagtttatcagtgatattacaggagtagacaatgtaatgctgggc
ggtaccatgcgtcagggaaccgttgcctatccatttggaggttccatagagagaatgcag
gtatatcgggatgtactttctgatgatgaacttattgctgtgacaggaaagactatatat
gcagagaatatcttttatgcaggagatgctacaaaatccaactatttccgaatcccatcc
cttttggcgttggattctggtacagtgattgcagcagcagatgcaagatatggtggcacc
catgatgcaaaaagtaagatcaatacagcatttgcgaaaagtacagatggtggaaaaacg
tggggacagccgacattgccattgaagtttgacgattatgtagcaaagaacatagactgg
ccacgggattcggtgggcaagaatgtgcagatacaagggagtgcttcctacatagatccg
gtacttttagaggataaggaaacacatcgggtatttctttttgctgatatgatgccggca
ggaattggaagttccaacgcttccgtaggttctggatttaaagaggttgatgggaagaaa
tatttgaaattgcactggaaggatgatgcggcaggaacgtatgattactctgtaagagaa
aatggaaccatttataacgatactacaaattcagcaactgaatatagtgttgatggtgaa
tataatctgtacaaaaatggaaatgccatgctatgtaaacagtatgattacaattttgaa
ggtacaaagttgttggaaacacagacggacacggacgtaaatatgaatgttttttataaa
gatgcagattttaaagtattcccaacaacttatttggcaatgaaatactcagatgatgag
ggagaaacctggtctgatttacagattgtaagtacctttaagccagaggaatcaaaattt
ctcgtattgggaccaggtgtaggcaaacagatagcaaatggagaacatgccggaagattg
attgttccattgtattcgaaatcatctgcagaactgggatttatgtatagtgatgaccat
ggaaataactggacatacgtagaagcagaccagaatacaggtggggcaaccgcagaagca
cagatcgtagaaatgccggatggttccttgaaaacttatctgcgtacaggatcaggatat
attgcacaagtgatgagtacagatggaggagaaacctggagtgagcgagttccactaaca
gaaattgcaacaacagggtatggaacgcagttgtcagtgattaattattcacagcctgtt
gatggaaagcctgctatcttactatcagcaccaaatgcgaccaatggcagaaaaaatgga
aagatatggattggtttgatcagcgaaacaggaaattccggaaaagataagtattctgta
gattggaaatattgctattctgtggatacccctcaaatgggctactcttattcctgtctg
acagagcttccggatggcgagatcgggcttttatatgaaaaatatgattcctggtcaaga
aatgaattgcatctgaaaaatatattgaaatatgagaggtttaatattgatgaactgaaa
gttcaaccataa
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