Mediterraneibacter gnavus: RGna_10415
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Entry
RGna_10415 CDS
T06719
Name
(GenBank) hypothetical protein
Organism
rgn
Mediterraneibacter gnavus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RicinB_lectin_2
Tox-REase-9
Ricin_B_lectin
CBM96
DUF6531
DUF2290
Motif
Other DBs
NCBI-ProteinID:
QHB23864
LinkDB
All DBs
Position
complement(2078128..2085102)
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AA seq
2324 aa
AA seq
DB search
MRDRILREVPEKRERCVKHFQMTQKGMAAAVYPAPVHYEEDGQWKEIDNRLEPVQEDGRE
VYRNFASAVRVSFAKESDTKELVTIEKDGKKILWGLSPFLRTKSTRNVNFKNKISTFRVL
EKEDFWKEAEMLDMKVSVLEEEESEEDEIRKMMCVPHLNGEGVYEEILPGIDLHYSIQGE
QLKENIRLNRKEAAEQELSFQLMHPGMELRSEEDGGLGLYDSENQESGRIFRLVKPYMYD
AAGNQSLQVEFQVEIGTESSVIKVVPDREWMQDTERVYPIVIDPMTETSKTKGNIEDTYV
FTGGNVPENPGNVYAYGSFVVGRSDELGKMRALLRFRDLPDIGKGSIIYGATMYIWQFEY
SSYSNPELPLLAYEVKNSWDEKSVRWGNQPAVDGAILDYKKVKQVINGNTVSITPIGFNV
TRLVRQWYNTGKNYGIMVKSKYEDDENLANRAYARFYASDSPSISSEQFPSGVFYYRNVN
GLEDYQSYHEQSAGRAGIGYTNDFTGNVVWSHLDVATEGGPMTTEIRHVYNSSEADTSSR
MGYGWRLSSQQELKESGIKDYPYVYIDEDGTKHYFYKDTNDGNKLKDEDGLGLTITVTSS
SEHDRYRTMETKDKVKYIFGQDGFLRFIEDLNGNSVKHQYGPNSAGNYLGYITDASGGFL
NIIYSTDEGKSKITAIQDTKGREIRYGYDAQGNLTSITYPDGSKSQFTYDGSHKLLSVTN
PDGYRVNYEYTNDFRVPRVSKVSETGQKNAPGQELKISYENGNTTIFEEPGLDGQMEHPG
DNKKTTWHFDNMGRPTDVLDADGFANNYSYYTSGMKNHKLSKDGSVQKTVCGLLRNPTFD
PSHGDGGWYTCRMSDGKRGAITHADGYIGTKSAKLTKTELTSEEGICQDVHLSAGTYTLS
AYVKTESLNPENQEQGAVVSVIRADRTRIMGERCIDYVTDKNVDDGWERLVLTFQLPAEE
TISVFVGMTRARGTLLVSGVQLETGNVANELNLIDNPGFERCTNDVPDNWGFHAAATGNK
SMITADKGRCAVLNGQMEQQLHLSQAVNISGQEGDIFNLSCWVNGFGIPDKQFSVDAAVI
YTDGTVKWHQLQCNPNIKGWQFVSNTFSTDDQNEGAKKTYKAIHVYLMYHNQVNQVLFKG
VQLVRDDGESYQYDDDGNLIHAVSAAEKESFSYDKKGSLTKLGSIDGTGFEYRYDTKNHL
TQAANSEGVRYRFTYNDKGQPIQMTADGGKYLGAVIPGRVYYIREKISGNYLDVRNSETA
NGTVVQLCTFFGFAAQKWKLIDGKDGYMQFEPLCGSGYRLDLNNKSEAEGEKIQIYGNNN
TDAQKWKLHPNADGSFQITSKATKDKKALTNGPKSTTSGQPVQSYTRKEENEHQDWYFEP
ADEGTVSAVPKAGGIYHIRVRHSGQYIDVKNASTAAGTQAVQFNYNGGMNQQYRLLPYDG
TYYQLEPVHAPGKVLAKSGTNDRGFSILSLEASMSGAANQLFRFEEVSPGNGYAIICKDG
NLSLDVMDYSHQKLADIILTAHQSNSQVNKWWILEECSERMESSMTYTSDYKQPKTITDS
RGNTVHYEYDDKNRLLTKLTDAKGNATSYVYDADTDKMTEVARMVDGKEVKVSYTYENEK
VTSIGHNGFTYDYAYDPFGNLESVSIGGRELERTTLRSRNGLADRITYATGEAVRNEYNP
EEQLAAQYLITADGREEKLFENTYDSCGKIARHKDLCSGVTSTYQYDLIGRMVGTDRSDG
MKLRKVYDEKNRVKGYTYQKDRVGHEVEFLYGDVEKQQKPGLGYGIEINGAQKIAYEYDA
LGRVIRTHNHFSDTNTSTQEYTYVSGKEEGVTTNLVASVREGNRAESYTYDACGNVETMV
ERSADGSERKIRYYYDALNQLVREDNQKQNQTICYTYDVGGNMVRRDEYRYTENPMITEA
PWKSDTFDYQTGGWRDQLRFYNGQAITYDAMGNPLQYLEMQMEWEKGHQLNHITGAGLDM
YCMYNDSGKRIRKTVNGVTTDFYLDGSAILMQTSSDGSRIDFFYDDKGNVFAMKYQNEMY
FYRKNLFGDILGILDSHGTELVKYEYNSWGKLLNLTDYSSNGLGRRNPFRFKGYYYDEEL
GMYYLNSRYYDPETGRFVNADDVEVLKTTPTALTDKNLYSYCDNNPVGRKDGTGAVWETV
FDVVSLGFSIAEVAANPYDPSAWAGVVGDAIDLIPIVTGVGEAVRALRFTDKMGNTLEIA
EAVDFTKDARDIIKSLEHTNGFTKSTRSAGRKIHKGYKSGPAFKAEYKEYKKVKGIRPDY
YNPKTKTIYELKPYNPRSAKAGVKQLKKYKKKIGKRSNVRLEFY
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atgagagatagaattttacgggaagtaccggaaaagagagagcgttgtgtcaaacatttt
cagatgacacagaagggaatggcggcagctgtatatccggctccggttcattatgaagaa
gacggacagtggaaagaaattgataaccgtctggaacctgtacaggaagacgggagagaa
gtttatcgaaattttgcgtccgcagttcgtgtaagttttgcaaaagagtcagatacaaag
gaactggtaacgatcgagaaagacggaaagaaaatcttatggggattgtcacctttttta
cgcacaaaaagtacacgaaacgtgaattttaaaaacaaaatttctacatttcgtgttttg
gaaaaggaagatttctggaaagaagcagaaatgttggatatgaaagtgtctgttttagaa
gaggaagagtcagaagaggatgagatccgaaagatgatgtgtgttccgcatttaaacgga
gaaggtgtgtatgaggaaattcttccgggaattgatctgcattactcaatccagggagag
cagctaaaagagaatattcgactgaacagaaaagaggcggcagaacaggaattgagcttt
cagctgatgcatcctggaatggagctgcgaagcgaagaagatggaggacttgggctgtat
gattcggaaaatcaggagtcaggaaggattttcagactggtgaaaccgtatatgtatgat
gccgcaggaaatcagtctcttcaggtggaatttcaagtagaaatcggcacagagagcagt
gttatcaaagttgtgccggatcgtgaatggatgcaggacacagaacgtgtttatccaatc
gtgattgatccaatgacagagacgagtaaaacaaaaggaaatattgaagatacgtatgtt
ttcacaggaggaaatgtaccggagaatccggggaacgtatatgcatatggatctttcgtg
gtagggcgaagtgatgaacttggaaaaatgagagcgctgcttcggtttcgagaccttccg
gatattggaaaaggttcgatcatttacggagcgaccatgtatatctggcagtttgaatat
tcatcctacagcaatccggagctgccgcttcttgcttatgaagtaaaaaacagctgggat
gaaaaaagcgtccgttggggaaatcagccggcagtagatggtgcaatactggattataaa
aaagtaaaacaggtaatcaatggaaatacagtttcgatcacaccgataggattcaatgtg
accagattggtgcgtcagtggtataacacaggaaaaaactatggaattatggtgaaatca
aaatatgaagatgatgaaaatctggcaaaccgtgcttatgcgagattctatgcatctgac
tcaccaagtatctcttctgaacagtttccaagcggtgtgttttattacaggaatgtgaat
ggtctggaagattatcagagttaccatgagcagtcagcagggcgcgcaggaatcggttac
acgaatgactttacaggaaatgttgtctggagtcatctggatgtggcaacggagggcggt
ccgatgacaacagaaatccgtcacgtatacaattccagtgaagcagatacctcttcccgt
atgggatacggatggagactcagcagccaacaggaattgaaagagagtgggatcaaagat
tatccgtatgtgtatatcgatgaagacggaacaaaacattatttctataaagataccaat
gacggtaataagctgaaagatgaggatgggctgggactgacgatcacagtgacgtcaagt
tctgaacatgaccgttatcgcacgatggaaacaaaagacaaagtgaagtatatattcgga
caggacggatttttacgattcatcgaagatctgaacggaaattccgtgaaacaccagtat
ggtccgaattcagcgggaaattatctgggatatattacagatgcgtcaggtggattttta
aatatcatttattcaacggatgaggggaaatcaaagataacagctattcaggataccaaa
gggcgagagatccgatatgggtatgatgcgcaggggaatctgacatccattacttatccg
gatggaagtaagagccagtttacttatgatggttctcataaactgctcagtgtgaccaat
ccggatggctatcgtgtaaattacgagtacacaaatgatttccgggtaccccgtgtcagc
aaagtatccgaaacgggacagaaaaatgcaccgggtcaggaattaaagatttcctatgaa
aacggaaatactacgatttttgaagaacctggattggatggtcagatggaacatccggga
gataataagaaaacaacgtggcattttgacaatatgggacgtccgacagatgtgctggat
gcagatggatttgcaaataattattcttactatacatccggcatgaaaaatcataagctg
agtaaagatggttctgttcagaaaacagtgtgtggtctgctgagaaatccaacatttgat
ccgtctcatggagatggcggatggtacacctgtcgtatgtcagatggaaaacggggagcg
atcacacatgcagatggatatattggtacaaaaagtgcgaaactgacaaaaacagagctg
acatcagaagaaggaatctgtcaggatgtgcatctgtcagctggaacatatacgttgtct
gcttatgtaaaaacagaatcgctgaacccggaaaaccaggaacagggagcggttgtatcc
gtaatccgggcagaccggaccagaatcatgggggaacgctgtattgactatgtgacagat
aaaaacgtggatgacggatgggagagactggttctcacattccagcttccggcagaagaa
accatttccgtgtttgtgggaatgacaagagcaagaggaacacttttggtaagtggtgtt
cagctggaaacaggaaatgtggcaaatgaactgaatctgatcgacaatccgggatttgaa
cggtgcacaaatgatgtgcctgataattggggatttcatgcagctgcaaccgggaataag
agtatgatcactgcagataagggaagatgtgcagtactgaacggacaaatggagcagcag
cttcatctgtctcaggctgtaaatatttcaggacaggaaggtgatatctttaatcttagc
tgctgggtaaatggatttggaattccggataagcaattttcagtggatgcagcagtcatt
tatacggatggtacagttaaatggcatcaattacagtgtaatcccaatattaagggatgg
cagtttgtcagcaacaccttcagtacagacgatcaaaatgaaggggcgaagaaaacatac
aaggcgatccatgtgtatctgatgtaccacaatcaggtgaatcaggtgttattcaaaggt
gtgcagcttgtcagagatgacggggagagttaccagtatgatgatgacgggaatctgatc
catgcagtgagtgcagcggaaaaagagagtttttcatacgacaaaaaaggaagtctgacg
aagcttggaagtattgacggaacagggtttgaatatcgatacgatacgaaaaatcatctg
actcaggctgccaattctgaaggagtccgttatcgatttacatacaatgacaaaggacag
ccgatccagatgacggcagatggcggaaaatatctcggagcagtcataccgggcagagtg
tattatatccgggaaaaaatttccggaaattatctggatgtcagaaacagtgagacggca
aacggaactgtggtacagttgtgcacgttctttggatttgccgcgcagaaatggaagctg
attgatggaaaagacggatatatgcagtttgagcctctttgtggctctggataccgcctg
gatcttaataacaaatctgaggcagagggagaaaaaattcagatttatggaaataacaat
accgatgcacagaaatggaagctgcatccaaacgcagatggaagtttccagatcaccagc
aaggcaacgaaagataagaaagcgctgacaaacggaccaaagagtacgacaagcggacag
ccggtgcagagttatacacgaaaagaagaaaacgaacatcaggactggtattttgaaccg
gcagatgagggaactgtttcagcagttccgaaagcgggagggatttatcatatccgggta
cgtcattcgggacaatatattgatgtgaagaatgcttcgacagcagcaggaacacaggca
gtgcagttcaactacaatggcgggatgaaccagcagtatcgtttgctgccatatgacggc
acgtattatcagttagagccggttcacgcaccgggaaaagtactggcaaaatcaggaacc
aacgacagaggtttttccattctttccttagaggcatctatgtcgggagctgcaaatcag
ctgttccgattcgaagaggtgtcaccgggaaatggatatgcgatcatctgtaaggatgga
aacctgtctctggatgtgatggattattcccatcaaaaattggcagatatcattctgaca
gcccaccagtcaaacagccaggtcaacaaatggtggatcctggaagagtgcagtgagcgc
atggaatcgtctatgacatacacatccgattataagcagccgaagacgatcacagattcc
agaggaaataccgttcattatgaatatgatgacaagaaccgtcttctgacgaagctgaca
gatgcaaaaggaaatgccacttcctatgtatacgatgccgacacggataagatgacagaa
gttgcgagaatggtggatggaaaagaagtgaaagtttcttacacctatgaaaacgaaaaa
gtgacgtccatcggtcacaatggatttacgtatgattatgcgtatgatccgtttggaaat
ctggaatccgtatcgattggaggaagagaactggagcgcaccacgcttcgaagccggaac
ggtcttgcggacaggattacctatgcgacaggggaagccgttcgaaatgaatacaatccg
gaagaacagcttgcggcacagtatctgatcaccgcagacggcagagaagaaaaactgttt
gaaaatacgtatgacagttgtggaaaaattgcaaggcacaaagatctttgcagtggagtg
accagcacataccagtatgacctgatcggaagaatggtaggaacagaccgttctgacggg
atgaaacttcgcaaagtgtatgatgagaaaaatcgtgtcaaaggatatacgtatcagaaa
gatcgagtcggacatgaggtggaattcctttacggggatgtggaaaaacagcagaaaccg
gggcttggatatggaatcgagatcaatggcgcccagaagattgcctatgagtatgatgcc
cttgggcgtgtgatccgtacccacaatcacttctccgatacgaatacatcgactcaggag
tatacatacgtctcaggtaaagaggaaggagtgactacaaacctggttgcatctgtccgg
gaaggaaaccgtgcagaatcttacacctatgacgcctgtggaaatgtggaaacaatggtg
gagcgaagcgccgatggcagcgaaagaaaaatccgctactactatgatgcactgaaccag
ctggtacgagaagacaatcagaagcagaatcagacaatctgttacacctatgatgtgggt
ggaaatatggtcagaagagacgagtaccgttataccgaaaatccgatgatcacagaagca
ccgtggaagtccgatacgtttgattatcagaccggaggatggagagatcagctccgtttc
tacaacggacaggcaattacctacgatgccatgggaaatccgctccagtatctggagatg
cagatggaatgggaaaaaggacatcagttgaaccacatcacaggagccgggctggatatg
tactgcatgtacaatgacagcggaaagagaatccgaaagacggtcaatggcgttacgaca
gacttttatctggatggttcggccattctgatgcagacgtccagtgacggcagcaggatc
gatttcttctacgatgacaagggtaatgtgtttgccatgaagtatcagaatgagatgtat
ttctaccgcaaaaatctttttggggatattctgggaattcttgacagtcacggaacggaa
cttgtaaaatatgagtataattcctggggaaaactgctgaatctgacggattacagttcg
aatggactgggcagaaggaatccattccgtttcaagggatactactatgacgaagaactg
ggaatgtactatctgaatagtcggtattacgatccggagacggggagatttgtcaatgcg
gatgatgtagaggttttaaagacaacgccaacagcattgacggataaaaacttatatagt
tattgtgataataatccggttggcagaaaagatggaacaggcgcggtttgggagactgta
tttgatgtagtttccttagggtttagtattgcggaagttgcagctaacccatatgatcca
agtgcatgggcaggtgtagttggtgatgcaattgatttgattccgattgttacaggtgta
ggagaagctgtgagagcactgcgatttaccgataagatgggaaatacgctagaaattgca
gaagcagtagactttaccaaagatgcaagagatattattaaatcattagaacataccaat
ggcttcactaagtccacaagaagtgcgggtagaaagatacataaggggtataaatcagga
ccagcgtttaaagcggagtataaagaatataaaaaagtaaaagggattagacctgattat
tacaatcctaaaactaaaacgatttatgagttaaagccttataatccacgatctgccaaa
gcgggtgttaaacaacttaaaaaatacaagaaaaaaattgggaaaagaagtaatgtacga
ctagaattttattaa
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integrated database retrieval system