Mediterraneibacter gnavus: RGna_10500
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Entry
RGna_10500 CDS
T06719
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03030
DNA replication
rgn03430
Mismatch repair
rgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGna_10500
03430 Mismatch repair
RGna_10500
03440 Homologous recombination
RGna_10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgn03032
]
RGna_10500
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_10500
Enzymes [BR:
rgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGna_10500
DNA replication proteins [BR:
rgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGna_10500
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGna_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
TIP49
AAA_22
AAA_30
AAA_19
AAA_assoc_2
AAA_18
AAA_5
AAA_14
RCF1-5-like_lid
AAA_16
AAA_7
PIF1
AAA_24
Mg_chelatase
TsaE
Rad17
DUF815
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QHB23879
LinkDB
All DBs
Position
complement(2096067..2097635)
Genome browser
AA seq
522 aa
AA seq
DB search
MSYTALYRKFRPVEFEDVKGQEHIITTLKNQIEANRIGHAYLFCGTRGTGKTTVAKIFAK
AVNCEHPVNGSPCGECAMCRSIAAGTSMNVIEIDAASNNGVDNIREIREEVAYRPTEGKY
KVYIIDEVHMLSIGAFNALLKTLEEPPEYVIFILATTEVHKIPITILSRCQHYDFKRISI
ETITDRMRDLMQEEQVEVEEKALRYVAKAADGSMRDALSLLDQCIAFYLGQKLTYDNVLE
VLGAVDTDVFSRLLRSVIRRDVPKVLDIVDDLVMQGRELTQLATDFTWYLRNLLLVKTSD
NIEDVLDVSTENMQQLQEEAGMVEADMLLRYIRIFSELSGQLKYAAQKRVLLEVALIKLC
TPAMETSSDSILDRIRVLEEKLEQGVISGGQERVVYVKEDGQAPAEPTPRPELPNAVPED
VQQVVKNFRPIADEASGMLRTYLKKARLSLAGDNRLMIVMPDALGADFVGREDRRKELES
LIENRIGKKVEVEVRHVEEGRRFEDTFVDIEKKINMEIIVED
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatacggcactttaccgaaagttccgtcccgttgaatttgaagatgtcaagggt
caggaacatattattactacattaaaaaatcagattgaagcaaacaggatcggacatgcc
tatctgttctgcggaacaagagggaccggtaagacaacggttgcgaagatttttgcaaag
gcagtcaactgtgagcatccggtgaatggaagtccctgcggggagtgcgcgatgtgccgc
tctattgcagcgggtacatcgatgaatgtgatcgagatcgatgcagcttcgaacaatggt
gtggacaacatccgtgagatccgggaagaagtggcataccgcccgacagaaggaaagtac
aaagtctatatcattgatgaggtgcatatgctgtcgataggggcgttcaatgcgctgtta
aagacactggaggaaccgccggagtatgtgatctttattctggcgacaaccgaggttcac
aagattcccatcacgattttatcccggtgtcagcattatgatttcaagcggatcagtatt
gagacgatcacagaccggatgcgtgatctgatgcaggaagagcaggtggaagtagaagaa
aaagcgctgcgctatgtcgcaaaggcggcagatggttcgatgcgtgacgcattgagtctt
ctggatcagtgtattgccttttatctggggcagaagctgacgtatgacaatgtgctggaa
gtactgggagcagtcgatacggatgtgttcagcagacttctgcgcagtgtgatcagacga
gatgtcccaaaagtgcttgatatcgtcgatgatctggtgatgcaggggcgggagcttacg
cagcttgccacggattttacatggtatctgcgaaacttgcttcttgtgaagacatctgat
aatatagaggatgttctggatgtatctacagaaaatatgcagcagcttcaggaagaggcc
gggatggtggaagcggatatgttgctccgttacattcggattttttcggaattgtcaggt
cagctgaaatatgcagcgcaaaaaagagtgcttctggaagtggctctgatcaagctttgt
acgcctgccatggagacgagctcagattctattctggatcggatccgtgtattggaagaa
aagctggaacagggcgttatatcaggtggtcaggaacgagttgtttatgtaaaggaagat
ggtcaggcaccggcggagccaacgccgagaccggaacttccaaacgcagtaccggaagat
gtgcagcaggtagtaaagaatttcagaccgatcgcagatgaggcatcgggaatgcttcgg
acatacctgaaaaaagcgcgtctaagccttgcaggtgacaaccgtctgatgatcgtgatg
ccggatgcactgggggcagattttgttggcagagaagatagacggaaggaactggaaagt
ctgattgaaaacaggatcggcaagaaggtggaagtagaagtacgccacgtagaagaagga
cgccggtttgaggatacatttgtagatattgagaagaagatcaatatggagattatagtg
gaggactga
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