Mediterraneibacter gnavus: RGna_10565
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Entry
RGna_10565 CDS
T06719
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rgn
Mediterraneibacter gnavus
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgn03032
]
RGna_10565
03036 Chromosome and associated proteins [BR:
rgn03036
]
RGna_10565
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_10565
DNA replication proteins [BR:
rgn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RGna_10565
Chromosome and associated proteins [BR:
rgn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RGna_10565
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RGna_10565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
UBA_HYPK
Transposase_mut
motB
NA37
PqqD
Motif
Other DBs
NCBI-ProteinID:
QHB23891
LinkDB
All DBs
Position
complement(2109624..2109899)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELIAAIAEQAEISKKDAEKALKAFVDVVTEQLKEGEKVQLVGFGTFEVSERAAREG
RNPQTGKTMKIAACKAPKFKAGKALKDAVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattgatcgcagcaatcgctgagcaggcagaaatttcaaagaaagat
gcagagaaagcattaaaagcttttgttgatgtagtaacagagcagttaaaagaaggagaa
aaagtacagttagtaggattcggtacttttgaagtaagcgaaagagcagcaagagaagga
agaaatcctcagacaggaaagacaatgaagatcgcagcttgcaaagctccgaaattcaaa
gctggaaaagctctgaaagatgctgtaaacgcataa
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