Mediterraneibacter gnavus: RGna_10660
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Entry
RGna_10660 CDS
T06719
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rgn
Mediterraneibacter gnavus
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rgn03016
]
RGna_10660
Enzymes [BR:
rgn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RGna_10660
Transfer RNA biogenesis [BR:
rgn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RGna_10660
Prokaryotic type
RGna_10660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QHB23908
LinkDB
All DBs
Position
complement(2131403..2132143)
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AA seq
246 aa
AA seq
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MKRLKLTVAYDGTNYCGWQIQPNGITVEEVLNRALRKLTGEEITVIGASRTDSGVHALGN
VAVFDSETSIPPERISYALNQRLPDDIVVIRSEEVSADWHPRYCNSKKTYEYHILNAKIP
DPTRRLTRYFVSFDLDIEKMKKAAQYLVGTHDFVSFCNVRTDVEDTVRTIYSLDILPVGD
EITIRIQGNGFLYNMVRIIVGTLVRVGRGFYTPEQVQEILEAKNRKAAGVTAPPQGLFLV
GIEYEE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattgaaactgaccgttgcttatgacggaacgaattattgtggatggcagatc
cagccgaatggaattacggtggaagaagttctgaaccgtgcgctcagaaaactgacaggg
gaagagattacggtcatcggggcaagcagaacagattccggggtacatgcccttgggaat
gtggcagtgtttgattctgaaacctccattccgccggagcggatttcatatgccctgaac
cagaggcttccggatgatattgttgtgatcagatcagaagaagtgtcagcagactggcat
ccgcgatactgcaattcaaaaaaaacgtatgaatatcatattctgaatgcgaaaataccg
gatcccacaagaaggctgacccggtattttgtgtcatttgatctggatattgagaagatg
aaaaaggctgcacagtatctggtagggactcacgattttgtgagtttttgtaatgtgcgt
acggatgtggaggataccgtgcgtacgatttacagtctggatattttgccggtgggagat
gagattactatccggatacagggaaatggattcttgtataatatggtgcgtatcattgtg
gggacactggtgcgcgtggggcggggattttataccccggagcaggtacaggagattctg
gaagcgaagaaccgcaaagccgcaggggtgacagctccgccgcaggggctgtttcttgta
ggaatcgagtatgaagaataa
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