Mediterraneibacter gnavus: RGna_12450
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Entry
RGna_12450 CDS
T06719
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03030
DNA replication
rgn03430
Mismatch repair
rgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGna_12450
03430 Mismatch repair
RGna_12450
03440 Homologous recombination
RGna_12450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgn03032
]
RGna_12450
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_12450
Enzymes [BR:
rgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGna_12450
DNA replication proteins [BR:
rgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGna_12450
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGna_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Zn_ribbon_Top1
DNA_pol_B_exo1
RNase_H_2
DEDDh_C
HVO_2753_ZBP
Rv2179c-like
CoiA_N
Zn_ribbon_8
DUF1272
Zn_ribbon_recom
zf-KKT2_KKT3
Motif
Other DBs
NCBI-ProteinID:
QHB24217
LinkDB
All DBs
Position
2512237..2512896
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AA seq
219 aa
AA seq
DB search
MREKGNRLVQYVPDYTVFDLETTGISANMDDIIEISAVKVKGGIVQDTFSTLVNPGRHIP
AQATKVNGITDQMVSEAPLIREAMTEFLRFVGEDILVGHNIQSFDMKFIYREVEELFQET
VSNDFIDTLYMARKCLPELKHHRLTDLAEHFGISSKGAHRALNDCVMNQKCFEEMAKLQK
KSVVFVCPKCGGEMIRRNGRYGEFWGCGNFPKCRYTQNI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaaaggaaaccgtctggttcaatatgtaccggattatacggtatttgatctg
gaaacgacaggtatcagtgcaaatatggatgatattatagaaatatcggcagtaaaggtg
aaaggtggaattgtgcaggatacattttctacattggtgaatcctgggagacacattccg
gcacaggctacgaaagtaaatggaattacagatcaaatggtgtcagaagcgccattgatc
cgcgaagcaatgacggagtttttgcgttttgtaggagaggatattctggtgggacataat
atccagtcatttgatatgaaatttatttatcgggaagtggaagaattatttcaggagaca
gtctcgaatgactttattgacaccttgtatatggcaagaaaatgtcttcctgaattgaaa
catcatcgattgacagatctcgctgagcattttggaatcagttctaaaggggcgcaccgg
gctttgaatgactgtgtgatgaatcagaagtgttttgaggaaatggcaaagcttcagaaa
aaatcagtagtgtttgtttgcccgaaatgtggtggagagatgattcgaagaaatggaaga
tatggggaattctggggatgtggaaattttccgaagtgcagatatacacagaatatataa
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