Mediterraneibacter gnavus: RGna_14670
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Entry
RGna_14670 CDS
T06719
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RGna_14670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_14670
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RGna_14670
DNA repair and recombination proteins [BR:
rgn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RGna_14670
Prokaryotic type
RGna_14670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QHB24590
LinkDB
All DBs
Position
2933795..2934463
Genome browser
AA seq
222 aa
AA seq
DB search
MSGINGDWYEALKGEFKKPYYKTLFNTVNEEYRTRQIFPPANDIFNAFHLTPLKDVKVVI
LGQDPYHNFNQAHGLCFSVKKGVQVPPSLVNIYKELQDDLGCTIPNHGCLTKWAEQGVLM
LNTVLTVRAHQANSHRGIGWEEFTDAAIMAVNAQDRPVVFILWGAPAQRKKRMLNNSKHL
ILEAPHPSPLSAYRGFFGSRPFSQTNHFLEEHGVTPIDWQIE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatcaatggagactggtatgaagcattaaagggggaatttaagaaaccttat
tataaaacattatttaatacggtcaatgaggagtatcggaccagacagatttttccgccg
gcgaatgatattttcaatgcgtttcatctgacacctttaaaagatgtgaaggtagtgatt
ctggggcaggacccgtaccacaatttcaatcaggcgcacgggctgtgcttctcggtgaaa
aagggagtgcaggtgcctccgtctctggttaatatttataaagagctgcaggatgatctg
ggctgtaccattccgaaccacgggtgtttgacaaaatgggccgagcagggagtactgatg
ctcaacacggtgctgactgtacgggcgcatcaggcgaattctcacagaggaatcggctgg
gaggagtttacagatgcagcgatcatggcagtcaacgcacaggaccgtccggtcgtattc
atcttatggggagcgccggcacagcggaaaaaacgaatgctcaataattcgaagcatttg
atacttgaagcgccgcatccaagcccgttgtctgcataccggggatttttcggaagcagg
ccgtttagccagaccaatcattttctggaagaacatggcgttacaccaatcgactggcag
attgagtag
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