Mediterraneibacter gnavus: RGna_15650
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Entry
RGna_15650 CDS
T06719
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rgn
Mediterraneibacter gnavus
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgn03032
]
RGna_15650
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_15650
Enzymes [BR:
rgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RGna_15650
DNA replication proteins [BR:
rgn03032
]
Prokaryotic type
DNA Topoisomerases
RGna_15650
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGna_15650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Zn_ribbon_GRF
zf-tcix
HVO_2753_ZBP
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
QHB24770
LinkDB
All DBs
Position
3150584..3152656
Genome browser
AA seq
690 aa
AA seq
DB search
MAHYLVIVESPAKVKTIKKFLGKNYTVAASNGHVRDLPKSQLGIDVEHDFEPKYITIRGK
GEILANLRKEAKKADKVYLATDPDREGEAISWHLAAALKLDEKKMRRITFNEITKNAVKA
SLKTPRDIDMDLVDAQQARRVLDRMVGYRISPLLWAKVKRGLSAGRVQSVALRIIADREE
EINAFIPEEYWSLDAILKVKGEKRPLTAKFYGTEKKKMTIHSKEELDEILQALEKETYEV
KDIKKGERIRRAPLPFTTSTLQQEAAKVLNFGTQKTMRIAQQLYEGIDVKGSGTIGVITY
LRTDSTRISEEADAAARAYITENYGAEYSAAGEANKKTEKKIQDAHEAIRPTDISMTPAS
LKESLSRDQFRLYQLIWKRFAASRMQPAKYETTSVKIGAGEYMFTVATSKVAFEGFRTVY
TEADEEKEVSNVLVNGLSMDSELTKEEFDTKQHFTQPPAHYTEATLVKALEELGIGRPST
YAPTISTILGRRYITKEAKNLYITEIGEVVNNIMKQSFPSIVDVNFTANMEGLLDMVEEG
KVQWKVVVSNFYPDLDEAVKTAEKELESVKIEDEVTDVICEECGRNMVIKYGPHGKFLAC
PGFPDCRNTKPYLEKIGVACPVCGKEVVIRKTKKGRKYYGCENNPECDFMSWQKPSKEKC
PECGGYMVEKGNKLVCANEQCGYVRNLKGN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcacattatctggtaattgtggagtcaccggcgaaagtgaagacgatcaaaaaattt
cttggaaagaactatacagtagcggcatcaaacgggcatgtcagagatttgccgaaaagt
cagctcggaatcgatgtggagcatgactttgagcccaaatatattaccattcggggaaaa
ggggagattctcgcaaacctgagaaaggaagcgaagaaagccgacaaagtatatctggcg
accgaccccgaccgtgaaggagaggcaatttcatggcatcttgcagcagcgctgaaattg
gatgagaaaaaaatgcgccgtattacattcaacgagatcacaaagaatgcagtcaaggcg
tcattaaaaacaccaagagatattgatatggatctggtggacgcacagcaggcaagacgt
gttctggacagaatggtaggatatcggatcagtccgcttttgtgggcaaaagtaaaacgg
ggattgagcgccggacgcgtgcagtctgtagcacttcgtatcattgcggaccgggaggaa
gagatcaatgcatttattccggaagaatactggagtctggatgcaatcttaaaggtgaaa
ggagagaaaagaccgctcactgccaagttctatggaaccgagaaaaagaagatgacgatc
cattccaaagaggagctggatgagattttacaggctttggaaaaagaaacatacgaagta
aaagatatcaaaaagggagagcgtatccgaagagcgccgcttccgtttacaaccagcact
ttgcagcaggaggcagcaaaggtgctcaacttcggtacacagaagacgatgcgtattgca
cagcagctgtatgaaggaattgacgtaaagggcagcggtacgatcggtgtgatcacgtat
ctgcgtactgattctacccgtatttcagaggaagcagatgcagcggcgagagcgtacatc
acagagaattacggcgcagagtattcagcagcaggagaagcaaataaaaagactgagaag
aagatacaggacgcgcatgaggcaatccgaccgacggacatttccatgacaccggcttcg
ttgaaagagtctctctccagagatcagttccgtctgtatcagctgatctggaaacggttt
gccgcaagccggatgcagcctgcaaaatatgagacgacttctgtgaagatcggagcggga
gaatacatgtttaccgtagcgacatctaaagtggcatttgagggattccgtacggtatat
acagaggcggatgaagaaaaagaagtgagcaatgttctggtcaacggattgagcatggat
tcggaactgacgaaagaagagtttgataccaaacagcatttcacacagcctccggcacac
tatacagaggcaacacttgtaaaggcactggaggagcttggaatcggacgtccgagtacc
tatgcaccaacaatctccacaattctcggaagacgttatattaccaaagaagccaagaat
ctgtatatcacagagatcggagaagtagtcaacaatattatgaagcagtcgtttcctagt
attgtggatgtcaactttacggccaacatggaagggcttctggatatggtggaagaagga
aaagtgcagtggaaagttgtcgtaagtaacttctatccggatctggatgaagcagtgaaa
actgcggagaaagaattagagagcgtgaagatcgaggatgaagtaacggatgtaatctgt
gaagagtgtggaagaaacatggtgatcaaatacggtcctcacggaaaattcctggcctgt
ccgggatttccggattgccgcaacacaaaaccgtacctggagaagatcggtgttgcctgc
ccggtctgtggaaaagaagttgtgatccgcaagacgaagaagggaagaaagtattacgga
tgtgaaaataatccggaatgtgattttatgtcatggcagaaaccgtccaaagaaaaatgt
ccggaatgtggcggatacatggtggaaaaagggaataaactggtctgcgcaaacgagcag
tgtggatatgtccgaaatttgaagggaaattag
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