KEGG   Mediterraneibacter gnavus: RGna_17560
Entry
RGna_17560        CDS       T06719                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
rgn  Mediterraneibacter gnavus
Pathway
rgn00521  Streptomycin biosynthesis
rgn00523  Polyketide sugar unit biosynthesis
rgn00525  Acarbose and validamycin biosynthesis
rgn00541  Biosynthesis of various nucleotide sugars
rgn01055  Biosynthesis of vancomycin group antibiotics
rgn01100  Metabolic pathways
rgn01110  Biosynthesis of secondary metabolites
rgn01250  Biosynthesis of nucleotide sugars
Module
rgn_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:rgn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    RGna_17560 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    RGna_17560 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    RGna_17560 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    RGna_17560 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    RGna_17560 (rfbB)
Enzymes [BR:rgn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     RGna_17560 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 KR adh_short RIH_assoc NAD_binding_10
Other DBs
NCBI-ProteinID: QHB25111
LinkDB
Position
3508749..3509825
AA seq 358 aa
MRTYLVTGGAGFIGSNYIHYMFKKYDNEIRIINVDKLTYAGNLENLKDIEDRENYTFVKA
DICDADAINKIFEENEIDRVVHFAAESHVDRSIKNPDVFVKTNVLGTLVMLNAAKAAWEL
PDGTFKEGKKFLHVSTDEVYGSLEEEGEYFYETTPYDPHSPYSASKASSDMLVKSYMDTY
KFPANITNCSNNYGPYQFPEKLIPLIINNALQGKNLPVYGDGKNVRDWLYVEDHAKGIDM
VQEKGRLFETYNIGGHNEKQNIQIIHIILDTLQEMLPEGDPRKELVSEKLITYVEDRKGH
DRRYAIAPDKIKEEVGWYPETMFEDGIRLTIKWFFENEEWMKNVTSGDYQKYYEEMYK
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgagaacatatttagtaaccggtggagccgggtttattggatcaaactatattcattac
atgtttaaaaagtatgacaacgaaatccgcatcatcaatgtagataagctgacatatgca
ggaaatcttgagaacctgaaagatatagaagacagagaaaattacacatttgtaaaggca
gatatctgtgatgcagatgcgattaacaagatttttgaagagaacgagattgacagagta
gtacattttgctgcagagagtcatgttgatcgaagcattaaaaatccggatgtatttgta
aagacaaatgtactcgggacacttgtgatgctcaatgcggcaaaagcagcatgggagctt
cctgacggaacatttaaggagggcaagaaattccttcatgtttctacagatgaggtgtat
ggatcactggaagaagagggagaatatttctatgagacaactccgtacgatccgcacagc
ccatactctgcaagtaaagcatcatcggatatgctggtaaaatcttatatggatacgtat
aaatttccggcaaatatcacaaactgtagcaataactatggcccgtatcagtttccggag
aagttgattccgctgatcattaacaatgctctgcagggcaagaatcttccggtatacgga
gacggaaagaatgtcagagactggctgtatgtagaagaccatgcaaaaggaattgacatg
gttcaggaaaaaggaagactttttgagacgtataatattggcggtcataatgaaaaacag
aatattcagattatccacattattctggatacattacaggagatgttgccagagggagat
ccaagaaaagaacttgtcagtgaaaagctgatcacatatgtggaagatagaaaaggacat
gacagacgttatgctattgcgccggataagatcaaagaagaagtgggctggtatccggaa
acaatgtttgaagacggtattcgcttgacgatcaaatggttctttgagaatgaggaatgg
atgaagaatgttacaagcggtgactatcagaaatattacgaagaaatgtataaataa

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