Rhodococcus globerulus: KYT97_00110
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Entry
KYT97_00110 CDS
T07544
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rgo
Rhodococcus globerulus
Pathway
rgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYT97_00110 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_00110 (mutM)
Enzymes [BR:
rgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KYT97_00110 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KYT97_00110 (mutM)
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KYT97_00110 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
TackOD1
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QXW02578
LinkDB
All DBs
Position
23194..24066
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AA seq
290 aa
AA seq
DB search
MPELPEVEVVRRGLQSHAVGAAIEAVEVLHPRAIRRHVLGSDDLIGQLTGQTIASAERRG
KYLWLVLEPAGVGVVVHLGMSGQMLVQPPTVDWEKHLRIRLALDSGADLRFVDQRTFGGW
SISPLVEVDGTLLPESVAHIARDPMDEAFDLESVVSVLRGKHTEIKRALLDQTVVSGIGN
IYADESLWRAKVHGNRIAETLTKPKLRELVTAARSVMGEALEQGGTSFDALYVNVNGESG
YFDRSLSAYGQENLPCPRCGAPIRREKFMNRSSFSCPRCQPAPRSRRNVA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaacttcccgaagtcgaagtcgttcgccgcggcctacagtctcacgctgtaggt
gcggcgatcgaggctgtcgaagttctccatccccgcgctattcgccgccacgttctcggg
tcggacgacctgatcgggcagttgaccggacagaccatcgcctcggccgagcgccgcggc
aaatacctgtggctggttctggaacctgccggtgtcggtgtagtggttcacctcgggatg
agcggtcagatgctcgttcagccgcccactgtggactgggaaaagcaccttcgtatccga
ctggctctcgattccggagccgatcttcggtttgtcgatcagcgcaccttcggtggctgg
tcgatttcgccgttggtcgaggtggacgggacgctgttgccggagtcggtcgcacacatc
gcacgtgacccgatggacgaggcattcgatctcgaatcggtggtgagcgttctgcgcggc
aagcacaccgaaatcaaacgtgcactgctcgatcaaaccgtggtctccggtatcggcaac
atttatgccgacgaatcattgtggcgggcaaaggttcacggcaacagaatcgccgaaacc
ctgacaaagcccaagctgcgtgagctcgtgacggcggcccgcagtgtcatgggtgaggcg
ctcgagcagggcggcacgtccttcgacgcgttgtacgtcaacgtgaacggcgaatccggc
tacttcgatcgctcactctcggcgtacgggcaggaaaatttgccgtgcccgcggtgtggt
gcgcccattcggcgtgagaagttcatgaatcgatcgtcgttcagttgcccgcgctgccaa
ccggcacccagatcgcggcgaaacgtagcgtag
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