Rhodococcus globerulus: KYT97_05215
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Entry
KYT97_05215 CDS
T07544
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rgo
Rhodococcus globerulus
Pathway
rgo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KYT97_05215 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_05215 (uvrA)
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYT97_05215 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KYT97_05215 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_21
RsgA_GTPase
AAA_16
AAA_25
nSTAND1
AAA_22
NACHT
DnaJ_CXXCXGXG
Viral_helicase1
ScfRs
NTPase_1
cobW
Motif
Other DBs
NCBI-ProteinID:
QXW05346
LinkDB
All DBs
Position
complement(1165279..1168239)
Genome browser
AA seq
986 aa
AA seq
DB search
MSDRLIVRGAREHNLRGVDLDLPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGSAH
CPVCGEKIARQTPQQIVDQVLDMEEGIKFQVLAPVVRTRKGEFVDLFEQLNTQGYSRVRV
DGVVYPLTDPPKLKKQEKHDIEVVVDRLQVKASSKQRLTDSIETALRLAEGIVVLDFVDR
EENAPDRERRFSEKLACPNAHPLAIDDLEPRSFSFNSPYGACPECTGLGIRKEVDPELVV
PDAELSLEDGAIAPWSMGQSSEYFGRLLSGLGDILGFDMKTPWNKLPAKARKAILEGSEE
QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESDQMKERYDGYMRDTPCPACGGARL
RPEILSVTIAAGDFGSKSIAEVCELSISDCADFLNSLTLGSREEAIAGQVLKEVQARLGF
LLDVGLEYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPYAGEHGGQVVHSGPYEELLTCDESITG
AYLSGRKFIEVPEIRRPVDRKRQVTVVGAREHNLDGIDVSFPLGVLTAVTGVSGSGKSTL
VNDILATVMANKLNGARQVPGRHTRINGLDQLDKLVQVDQSPIGRTPRSNAATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKSIAEVLDMPIEEAAEFFQPVTSIHRYLKTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLIVINGLVDKGNSVIVIEH
NLDVIKTSDWVVDMGPEGGSGGGTVVAEGTPEEIAAVPESYTGKFLSEVLHAQQAPVKKK
TVAKKRAAKATAPKKAAPRKKSASVA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatcgcctgatcgtgcggggtgcgcgagagcacaatctgcgaggagtcgacctg
gatctcccgcgagacagcatgatcgtcttcacgggtttgtcgggttcgggtaaatccagc
cttgcgttcgacacgatcttcgccgaaggacagcgccggtatgtcgagtcactctcggcg
tacgcgcgtcagttcctgggccagatggacaaaccagatgtcgatttcatcgaaggcttg
tcgcctgcggtgtcgatcgatcagaagtcgaccaaccggaacccccggtcaaccgtcgga
accattaccgaggtctacgactatcttcgtcttctctatgcccgcgcaggttccgctcac
tgcccggtgtgtggggagaagatcgcacgccagacccctcaacagattgtcgatcaggtc
ctcgacatggaggagggcatcaagttccaggtcctcgctccggtggtgcgcacccgcaag
ggtgagttcgtcgaccttttcgaacagctcaatacgcagggttactcacgtgtacgggtt
gatggtgtcgtctaccccttgaccgatccgccgaagctgaagaagcaggaaaagcacgac
atcgaagttgtcgtcgatcgtcttcaggtgaaggcaagctccaagcagcgactcacggat
tcgatcgagaccgctctccgccttgccgagggcattgttgttctcgactttgttgaccgt
gaagaaaacgcgcctgaccgggagcggcgattctccgaaaagctggcgtgccccaacgcc
catccactcgcgatcgacgatctcgagccgcgttcgttctcgttcaattcgccgtacgga
gcctgcccggagtgcacgggtctgggtattcgcaaagaggtagaccccgaacttgttgtt
cccgatgcggagttgagcctcgaggacggagccatcgcgccgtggtcgatggggcagagt
tccgagtacttcgggcgcttgctgtccggtctcggcgacatcctcggcttcgatatgaaa
acgccgtggaacaagcttccggccaaggcgcgcaaggcaattctcgaaggtagtgaggag
caggtccacgtccggtacaagaaccggtacggccgtacccgttcttactacgcggagttc
gagggcgtcatgccctttctgcatcgcaggctcgagcagactgaatccgatcagatgaag
gaacgttacgacggctacatgcgtgacaccccgtgtcccgcatgtggcggtgcgcgactg
cgtccggaaatcctctcggtcactattgctgccggagatttcggcagcaagtccattgcg
gaggtctgtgaactctcgatctccgactgcgccgatttcctgaacagcctcacactcggt
tcacgcgaagaagccatcgcgggacaggtgctcaaggaagttcaggcccgcctcggattc
ctcctcgacgtcggactcgaatatctctcactgtcgcgtgccgcgggcaccctgtccggc
ggcgaggcccagcgaatccggctggcaacgcagatcggttcgggtcttgtcggtgtgctc
tacgtgctggacgagccgtccatcggtttgcaccagcgagacaaccgtcgactgatcgaa
acgctgaccaggcttcgcgatctcggcaataccctgattgtggtcgagcacgacgaagac
acgattcgtacctccgactgggtggtcgacatcggtccgtacgccggagagcacggcggc
caggtagtccacagcgggccttacgaagagctgctcacctgcgacgagtcgattaccggc
gcttatctgtccgggcgaaagttcatcgaggtcccggagatccgtcgccccgtcgatcgt
aagcgtcaggtcaccgttgtcggtgcgcgtgagcacaacctcgacggcatcgacgtgagc
ttcccgttgggtgttctcaccgcggttaccggcgtttccggttcgggcaagtcgacattg
gtgaacgacatcctggccaccgtcatggccaacaagctcaacggcgcgcgtcaggtgcct
ggccgccacacccgaatcaacggacttgaccaactcgacaagttggttcaggttgatcag
tcgccgatcggccgtaccccgcggtccaacgcggccacgtacaccggtgtgttcgacaag
attcgtacgctgttcgctgccacaaccgaagccaaggtgcgcggctatcagccggggcgc
ttctcgttcaacgtcaagggcggtcgctgcgaggcgtgctcgggtgacggaacactcaag
atcgagatgaacttcctgcccgacgtgtacgtaccgtgcgaggtctgccacggagctcgg
tacaaccgcgagacactcgaggttcactacaagggcaagtccatcgccgaggttctggac
atgcccatcgaggaggcagcggagttcttccagccggtcacctcgattcaccggtacctg
aagactctggtggacgtcggtctcggttacgtgcgactgggacagccggcaccgacgctg
tccggcggcgaggcgcagcgcgtcaagcttgccgccgagcttcagaaacgttccaccgga
cgtaccgtctacatcctcgacgagccgacaaccggcctgcatttcgaagacattcgcaag
ttgctgatcgtcatcaacggattggtcgacaagggcaacagtgtcatcgtgatcgagcac
aacctcgatgtcatcaagacatcggactgggttgtcgacatgggtcccgaaggtggatcc
ggcggcggaaccgttgtggcagaaggaactccggaagaaattgctgccgtgcccgagagc
tacaccggcaagttcctcagcgaggtactccatgcgcaacaggctcccgtgaagaagaag
actgtggcgaagaagcgcgccgcgaaggctacggcccccaagaaggctgcgccgcggaag
aagtccgcatcggtggcctga
DBGET
integrated database retrieval system
