Rhodococcus globerulus: KYT97_06365
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Entry
KYT97_06365 CDS
T07544
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rgo
Rhodococcus globerulus
Pathway
rgo03030
DNA replication
rgo03430
Mismatch repair
rgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYT97_06365 (dnaE)
03430 Mismatch repair
KYT97_06365 (dnaE)
03440 Homologous recombination
KYT97_06365 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgo03032
]
KYT97_06365 (dnaE)
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_06365 (dnaE)
Enzymes [BR:
rgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYT97_06365 (dnaE)
DNA replication proteins [BR:
rgo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYT97_06365 (dnaE)
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYT97_06365 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
QXW03666
LinkDB
All DBs
Position
complement(1434378..1437914)
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKVGAMFEEATRLGMTAVGMTDHGNMYGASQFYNEAVKAG
IKPIIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWPRMDEELIASHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEI
WGPDNFFLEVMDHGLSIERRVREGLLNIGQQLGIPPLATNDCHYVTKDAAENHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRAIWDSEVPGACDNTVTIGERVQSYEDVWKFHDR
MPIFPVPEGHTQQTFLRAEVMRGLDRRFPSGPPEEYLARADYEIGVINEMGFPAYFLVVG
DLINHAKEVGIHVGPGRGSAAGSLVAYAMGITNIDPLPYGLLFERFLNPERVSMPDIDID
FDDRRRGEMVRYATEKWGDDRVAQVITFGTIKTKAAIKDSARVQFGKPGFAIADQITKAL
PPPIMAKDISVSGITDPKHERYKEAAEVRSLIDSSPDVAKIYKTAVGLEGLIRNAGVHAC
AVIMSSEPLMDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDTLENIK
ANRGIDIDLDTLPMDDPATYELLARGDTLGVFQLDGGGMRELLKLMQPTGFGDIVAALAL
YRPGPMGVDAHISYAKRKNALEEVSPIHPELEEPLAEILSETYGLIIYQEQIMQLAQKVA
GYTLGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNNFSEAAIKALWDTVLPFAGYAFNK
SHSAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKSAVYLADCRKMGITVLPPDVNE
SRVDFATVGEDIRFGMGSVRNVGANVVASIIKARTEKGKFTDFSDYLGKIDAMACNKKVT
ESLIKAGGFDSLEHPRKGLMLVHADAIDAVMSTKKAEAIGQFDLFGGSEVDESIASVFDV
RIPEEEWETKHRLALEREMLGLYVSGHPLNGVEHILKQQSDTSIAAILDGGVQDGAQVTL
GGIIASVDRRVNKNGLTWCIVQLEDLVGGIEVLFFPQAYAVYGMDIAEDAIVLVKARVSI
RDDRMSLIGNDLAVPDLSAIGVARPLSVSLPLRQCTKDKLGALKQILTRHPGTSDVHVRL
IGSNEITMWKVDDVLRVEPSSALMGDLKALLGPGCLAV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactcgttcgttcatcttcacaatcacaccgagtactcgatgctcgacggcgcg
gccaaggtcggcgccatgttcgaggaggccactcggctcggcatgaccgccgtcggtatg
accgaccacggaaacatgtacggcgccagccagttctacaacgaagcggtcaaggccggg
atcaagccgattatcggtatcgaggcgtacatcgcgccggaatcccggttcaacaccaag
cgtgtgttgtggggcgatcgcagccagaagtccgacgacgtctccggtagcggcgcgtat
acgcacatgacgatggtcgcggaaaatgcgacaggcctacgcaacctcttcaaactgtct
tcgcttgcgtccatcgagggccagttgggcaagtggccccgtatggacgaggagctcatc
gcctcgcatgccgagggaatcattgccaccacgggttgcccgtccggtgagatccagacg
cgcctgcgactcgggcatgatcgtgaagccctcgaagcggcagcgaagtggcaggaaatc
tggggccctgacaatttcttcctcgaggtgatggaccacggtctctcgatcgagcgtcgg
gtgcgtgagggtttgctcaatatcggtcagcagctcggcattccgccgctcgcgaccaac
gactgccactacgtcaccaaggacgcagccgagaaccacgaggcgctgctgtgcatccag
accggtaagacgctctcggatcccacgcgcttcaagttcgacggcgacggttactacctc
aagtccgcggccgagatgcgggctatctgggacagcgaagttcccggagcctgcgacaac
acagtgacaatcggtgagcgcgtccagtcgtacgaggacgtgtggaagttccacgaccgg
atgccgatcttcccggtacccgaaggacatacgcagcagacgttcctgcgcgccgaggtc
atgcgcggcttggatcgacgtttccccagcggcccgcccgaggagtacctcgcgcgtgcc
gactacgagatcggcgtcatcaacgagatgggcttcccggcctactttctggtggtcggt
gacctcatcaaccatgcaaaagaagtgggcatccacgtcggacccggtcgtggatccgct
gcaggttcgttggtggcgtacgcgatgggtatcaccaacatcgacccgcttccgtacggt
ctgctgttcgagcgattcctcaaccccgagcgcgtgtcgatgcctgatatcgatatcgac
ttcgacgatcgccgtcgcggcgagatggtgcgttacgccaccgagaagtggggcgatgac
cgcgtcgcgcaggtcatcacgttcggaaccatcaagaccaaggctgccatcaaggactcc
gctcgcgtgcagttcggtaagcccggttttgctattgccgaccagatcaccaaggcattg
ccgccgccgatcatggccaaggacatctcggtatccggtatcaccgatcccaagcacgag
cggtacaaggaagctgccgaggttcgctcgctcatcgactccagcccggacgtcgcgaag
atctacaagaccgcggtgggtctggagggtctgatccgtaacgcgggtgtccacgcctgt
gccgtgatcatgtcgtccgagccgttgatggatgcgattccggtgtggaagcgcgcgcag
gacggtgcgatcatcacgggctgggattacccgtcgtgtgaggccatcggtctactcaag
atggacttccttggtctgcgaaacctcaccgtcatcggtgacacactcgagaacatcaag
gccaaccgcggtatcgacatcgacctcgacacgttgccgatggacgacccggctacgtac
gaactcctggcgcgcggcgacactctcggcgtgttccagctcgacggtggcggtatgcgt
gagcttctgaaactgatgcagcccaccggtttcggcgacatcgtggccgcactggcactg
taccggccgggtccgatgggtgtggacgcccacatctcgtacgccaagcgtaagaacgcg
ctcgaagaagtcagccccattcaccccgagctggaagaaccgctcgcggagatcctctcg
gagacgtacggcctgatcatctaccaggagcagatcatgcaactggcgcagaaggtggcc
gggtacaccctggggcaggccgacttgctgcgccgcgccatgggtaagaagaagctgtcc
gaactcgagaaggcatacgccggtttccgtcagggcatgttggacaacaacttcagcgaa
gccgccatcaaggcgctctgggataccgttctcccgttcgccggctacgcattcaacaag
tcgcactcagctggttacggtctcgtctcgttctggaccgcgtacctcaaggcgaactat
ccggccgagtacatggccggtctactcacctcggtcggcgacgacaaggacaagtccgct
gtctatcttgccgactgccgcaagatgggcatcacggtgctgccgcctgacgtcaacgag
tcgcgcgtcgacttcgcgacggtgggggaggacatccgcttcggtatggggtccgtccgc
aatgtgggcgcaaatgtcgtggcatccatcatcaaagcgcgcacggagaagggtaagttc
accgacttctccgactatctcggcaagatcgatgcgatggcgtgcaacaagaaggttact
gaatccctcatcaaggcaggcggattcgactctctcgaacatccgcgtaagggcttgatg
ttggtgcacgccgacgctatcgatgccgtcatgagcaccaagaaggcggaggccatcgga
cagttcgacctgttcggcgggtccgaagtggacgagtccatcgcgtcggtgttcgacgtt
cgcattcccgaagaggaatgggaaaccaaacaccgccttgcgctcgaacgagagatgttg
gggctgtacgtttccgggcacccgctcaacggcgtcgaacatatcctcaagcagcagtcc
gatacctcgattgccgcaatcctcgacggtggtgtccaagacggtgcgcaggtcacattg
ggaggcattattgcgtcggtcgatcgccgagtgaacaagaacggcctcacctggtgcatc
gtgcaactcgaggatctggtcggcggtatcgaggtgctgttcttccctcaggcgtacgcc
gtgtacggcatggacatcgccgaggatgcgatcgttctggtgaaggcgcgggtgtctatt
cgagatgaccgtatgtcgttgatcggcaacgatcttgcggtgccggatctttcggctatc
ggcgtggcgcgaccgctctcggtgtcgttgccgctgcgtcagtgcaccaaggacaagttg
ggcgcgctcaagcagatcctgacccgccacccgggcacgtcggacgtgcatgtccgtttg
atcggaagcaacgagatcacgatgtggaaggtcgacgacgttctgcgggtagagccgtcg
tcagctctgatgggcgatctcaaggcgctcctcgggcctggctgcctggcggtttag
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integrated database retrieval system
