Rhodococcus globerulus: KYT97_22150
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Entry
KYT97_22150 CDS
T07544
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rgo
Rhodococcus globerulus
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgo03032
]
KYT97_22150 (topA)
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_22150 (topA)
Enzymes [BR:
rgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KYT97_22150 (topA)
DNA replication proteins [BR:
rgo03032
]
Prokaryotic type
DNA Topoisomerases
KYT97_22150 (topA)
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KYT97_22150 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXW01040
LinkDB
All DBs
Position
4860964..4863891
Genome browser
AA seq
975 aa
AA seq
DB search
MAKADNGSGQGASGNPRRLVIVESPTKARKIAPYLGKDYVVEASVGHIRDLPRGAADVPA
KYKGEPWARLGVNVDHDFEPLYVVSPEKKGKVAELKSLLKDADELFLATDPDREGEAIAW
HLLETLKPKIPVRRMVFHEITEPAIRAAAEDTRELDIDLVDAQETRRILDRLYGYEVSPV
LWKKVMPRLSAGRVQSVATRVIVQRERERMAFKSASYWDISATLDAGADASPRSFGARLV
SVDGSRVASGRDFGPDGKLKGSAVTVLDEAYARRLAEALHGVDLTVSSAEDKPYTRKPYP
PFMTSTLQQEAGRKLRFTSERAMRIAQRLYENGYITYMRTDSTTLSESAIAAARAQATEL
YGPEYVHPTPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSKLDADEFKLYELIWQRTV
ASQMADARGNTLTLRISGTAGTGEDCTFSASGRTIVFAGFLKAYVESVDEEAGGQSDDAE
SRLPILVKGQEVTATKLDPDGHSTNPPARYTEASLIKTLEELGIGRPSTYSSIIKTILDR
GYVYKRGSALVPAWVAFAVVGLLEAHFGRLVDFDFTAGMEDDLDAIAGGREQRGNWLSSF
YFGGEHGAEGSVAREGGLKKMVGVNLEEIDAREVNSIRLFDDAEGREVHVRVGRFGPYLE
RMVQNPDDPEGDLISQRANLPDDLPPDELTPEYAEKLFATPQEGRKLGVDPLTGNEIVAK
EGRFGPYVTEILPEPPAEPEPDIVPVPESEEVSAGTTKTAVKKAAAKKAPAKKAAKKVAG
PKPRTGSLLKSMDLATVTLEDALRLLSLPRVVGVDPESKEEITAQNGRYGPYLKKGTDSR
SLADEEQMFTVTLDDALKIYAEPKRRGRQASATPPLRELGVDPVSEKPMVIKDGRFGPYV
TDGETNASLRKDDAVESISDARASELLADRRARGPVKKKAAAKKAPAKKAAAKKTAAKKA
PAKKAAAKKAPAKKD
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagcggacaacggcagcggtcagggagcgtccggtaaccctcgtcgcctcgtg
atcgtcgagtcaccgaccaaggcgcgcaaaatcgctccttacctcggtaaggactacgta
gtcgaggcatcggtcggtcacattcgcgacctgccgcgcggcgcagcggatgttccggcc
aagtacaagggcgagccgtgggcccgtctcggcgtcaacgtcgatcacgacttcgagccg
ctctacgtcgtcagcccggagaagaagggcaaggtcgccgaactcaagtcactcttgaag
gacgctgacgaactcttcctcgcaactgaccccgaccgcgagggtgaggccattgcgtgg
catctcctcgagaccctgaagcccaagattccggttcgtcgaatggtcttccacgagatc
accgaaccggcaattcgggctgctgccgaagacacccgtgagctcgacatcgacctcgtc
gacgctcaggaaacccgccgtatcctcgaccgtctctacggttacgaggtcagcccggtg
ctctggaagaaggtcatgccgaggctctcggcgggccgcgtccagtcggttgctacgcgt
gtcatcgtgcagcgtgagcgtgagcgcatggcgttcaagtcggcttcgtactgggacatc
tccgccacgcttgatgccggcgccgacgccagcccacgcagtttcggtgcgcgtcttgtc
tcggtcgacggttcccgcgttgcttccggtcgcgatttcggaccggacggaaagctcaag
ggcagtgccgtcactgtgctggacgaggcgtacgcgcgtcgactggccgaggctttgcac
ggcgtcgacctcacggtttcgtctgcagaagacaagccgtacacccgtaagccgtatccg
ccgttcatgacgtcgacgctgcagcaggaggccggtcgcaagcttcgcttcacgtccgag
cgggccatgcgtatcgcgcagcgtctgtacgaaaacggctacatcacctacatgcgaacc
gactcgacgacgctgtccgagtcggcgatcgctgctgctcgtgcgcaggccaccgagttg
tacggcccggagtacgtccatccgacgccgcgtcagtacacccgcaaggtcaagaacgcg
caggaagcgcacgaggcaattcgtccggccggcgatgtgttccagacgccggggcagttg
cactccaagctcgacgccgacgagttcaagttgtacgaactcatctggcagcgcaccgtg
gcttcgcagatggccgacgctcggggcaacacgctgacgcttcgcatttccggcacggcc
ggcacgggtgaggactgcacgttctccgcgtccggtcgcaccatcgtatttgcgggcttc
ctcaaggcttacgtcgagagcgtcgacgaagaggcaggcggtcagtccgacgatgccgaa
tccaggcttccgatactggtcaagggccaggaagtcacggcaaccaagctcgatcccgac
ggtcacagcaccaacccgccggcgcgatacaccgaagccagcctgatcaagaccctggaa
gagctcggtatcggccgaccgtcgacgtattcgtcgatcatcaagaccatcctcgaccgc
ggatacgtctacaagcggggcagcgcactggttccggcgtgggttgccttcgccgtggtc
ggtctgctcgaggcgcacttcggccggttggtcgacttcgatttcaccgcaggcatggaa
gatgacctcgacgctattgccggtggacgtgagcagcgcggtaactggctgagcagcttc
tacttcggtggcgagcacggtgccgaaggttcggtcgcccgtgaaggcggcctcaagaag
atggtcggcgtcaatctcgaggagatcgacgcccgcgaggtcaactccatccggctgttc
gacgacgccgagggtcgtgaggttcacgtacgtgtcggccgcttcggcccgtacctcgag
cgcatggttcagaatccggacgaccccgaaggcgatctgatctcgcagcgggccaatctt
cccgatgacctgccgccggacgagctcacccccgagtacgccgagaagctgttcgcgacg
cctcaagaaggtcgcaagctgggcgtcgatcctctgaccggaaacgagatcgtcgcgaag
gagggccgcttcggtccttacgtgacggagattctgcccgagccgccggccgagccagag
ccggacatcgtgccggttccggaatcggaagaggtcagcgcgggcaccaccaagactgcg
gtgaagaaggccgcagccaagaaggctcccgcgaagaaggctgcgaagaaggttgcgggc
cctaagccacgcaccggatcgttgctcaagtccatggacttggcgacggtcaccttggag
gatgcacttcggttgctgtcccttccccgcgtcgtgggtgtcgatcccgagagcaaggaa
gagatcaccgctcagaacggccgatacggtccgtatctgaagaagggcaccgactcgcgt
tccctggccgacgaagagcagatgttcacggtcaccctcgacgacgcgctcaagatctac
gccgagcccaagcgacgtggacgtcaggcgtcggctactccgccgctgcgtgagctgggt
gtcgacccggtcagtgagaagccgatggtgatcaaggacggtcgtttcggtccgtacgtc
accgacggtgagaccaacgccagcctgcgcaaggacgatgccgtcgaatccatctcggat
gctcgtgcgtcggagttgctcgctgaccgtcgtgctcgcggaccggtgaagaagaaggcc
gctgcgaagaaagccccggcgaagaaggccgctgcgaagaagaccgccgccaagaaggcc
ccggccaagaaagcggctgccaagaaggctccggcgaagaaggactga
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