Rhodococcus globerulus: KYT97_23375
Help
Entry
KYT97_23375 CDS
T07544
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rgo
Rhodococcus globerulus
Pathway
rgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KYT97_23375 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgo03400
]
KYT97_23375 (recD)
Enzymes [BR:
rgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KYT97_23375 (recD)
DNA repair and recombination proteins [BR:
rgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KYT97_23375 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
UvrD-helicase
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
AAA_22
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_24
UvrD_C
DO-GTPase1
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QXW01252
LinkDB
All DBs
Position
5126922..5128787
Genome browser
AA seq
621 aa
AA seq
DB search
MTEAQLAQRARGIVRTFNEAGVLLAADVHVAVRLCTLGGEPSPGVMLVAALAVRAVRSGS
VCLDLRRMQDVSVDGATEAELAALPWPEPEAVISALRLSPLVIGGTAGPLRPLRLVDSDD
GELLYLDRYFLQEQTIRRVLDERAETHPTVDTEQSRTRLQTTFQGDSGHTSGPDRQRIAA
ALSLTHWTTVIAGGPGTGKTHTVARILALLLEEHGSELRIGLAAPTGKAAARLQESVREQ
AEQLKLPADLTAMTLHRLLGWQRGSASRFKYNASNRLPFDVIVVDETSMVSLTLMARLLE
AVRPDARLLLVGDPDQLTSVDAGAVLADLVARPSNAEGNKALADIVGADLEPGGTAESLT
AHDRERLRGGIVQLSRGRRFGGIIAQLASAVREGKAEEVIGLLRSGDSAVSFHAPEDLDA
LRSDIVTSAESATGFAKQGDAMRALKAMESHRLLCAHRDGPYGVSRWAKQAMDWVGAAAG
EFLNPEQWYPGQPLLVTANDYEVGIYNGDTGVIVEGEGGVLMAAFQRGDNNFQLHPSSLS
SVQTVYAMTIHRSQGSQYDTVSVMLPAEASSLLTRELLYTAITRARTHVRVIGTEESVRA
GVERQVLRASGLRRAIRPYDG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcgcagttggcccagcgagcacgtgggatcgtgcgcacgttcaacgaggcc
ggggtccttctggccgccgacgtccacgttgctgtcagattgtgcacgctgggcggggaa
ccgtcgccaggcgtgatgttggtggccgcgttggcggttcgggcggtgcgctcgggatcg
gtttgccttgatctacgacgcatgcaggatgtcagcgtcgacggggccaccgaagccgaa
cttgccgcgttaccctggccggaacctgaagcggtgatcagcgcgttgcggttgagcccc
ttggtgatcggcggaactgccgggccgttgcgaccgctgcgactggtggatagcgacgac
ggagagttgctgtacctggatcggtactttttgcaggagcagacaattcggcgggtgctc
gacgagcgagccgagacgcatccgacagtcgacaccgaacagtcgcgcacccgattgcag
acaacttttcagggggattcaggccataccagtggccctgaccgtcagcgcattgcggca
gccctgtcgcttacacactggacgacggttatcgcgggtggcccgggtaccggcaaaact
cacacggtggcacgtattcttgcgctgcttctcgaagagcacggcagcgagttacgaatc
ggtctggctgcgcccaccggcaaagcggctgcgcgattgcaggagtcggtgcgcgagcag
gcggagcagttgaaacttccggcagacctcacggcgatgacgctgcaccgtttgttgggc
tggcaacggggcagcgccagcaggttcaagtacaacgcgtccaaccgcctgccgttcgat
gtgatcgtggtggacgagacgtcgatggtgtcgttgacgttgatggctcgattactcgag
gccgtgcgtcctgacgcgcgactgctgttggtcggagatccggatcagttgacgtcggtg
gatgccggcgcggtcctcgcggatcttgttgcacgaccgtcgaatgcggagggaaacaag
gcgctggccgacattgtcggtgcggacttggaacctggaggtactgccgaatcactcacc
gcgcacgatcgtgaacgtctccgcggcggcatagttcaactttcccgtggccgacgattc
ggcggaatcattgcgcagttggcaagcgcggttcgggagggcaaggcagaggaggttatc
ggccttcttcgtagcggtgattccgccgtgtcgtttcacgcgcccgaagacctcgacgcg
ctgcgttccgatatcgtcacgagcgctgagtccgcgactggattcgcgaagcagggtgac
gcgatgagagcgctgaaagcgatggaatcgcatcggcttctgtgcgcacaccgcgacggc
ccgtacggcgtcagtcggtgggcaaaacaggccatggactgggtgggggctgcggcaggg
gagttcctgaatcctgaacagtggtatcccggccagccgctgttggtcacagccaacgac
tacgaggtcggcatctacaacggagataccggagtgattgtcgagggcgagggcggagtg
ctcatggcagccttccagcgcggcgacaacaatttccagttgcacccgagctcattgtcg
tccgtgcagacggtctatgcgatgaccatccaccgaagccagggcagtcaatacgacacc
gtctccgtcatgttgccggccgaggcgtcgtcgctgctcactcgggagttgttgtacacc
gcgattactcgcgcgcgaactcatgttcgcgtgatcggaacagaggagtccgtgcgcgcc
ggcgtcgaacgccaagtgctccgggccagcggcttgcgtcgtgccatccgtccctacgac
ggttga
DBGET
integrated database retrieval system
